Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MH973661Streptococcus phage SW53683638.777StreptococcusGroup I MoineauvirusMoineauvirusUnclassifiedAliceevansviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus thermophilusHigh-qualityHigh-quality100.000AAI-based (high-confidence) MoineauvirusMoineauvirus SW5Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateantirepressor orf_28;cro orf_29
MH973662Streptococcus phage SW73591739.124StreptococcusGroup I MoineauvirusMoineauvirusUnclassifiedAliceevansviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus thermophilusHigh-qualityHigh-quality97.280AAI-based (high-confidence) MoineauvirusMoineauvirus SW7Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MH973663Streptococcus phage SW243209238.309StreptococcusGroup I VansinderenvirusVansinderenvirusUnclassifiedAliceevansviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus thermophilusMedium-qualityGenome-fragment86.940AAI-based (high-confidence) VansinderenvirusVansinderenvirus SW24Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateantirepressor orf_24;cro orf_25
MH973725Pseudomonas phage SaPL4579652.564PseudomonasGroup I BruynoghevirusBruynoghevirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosaHigh-qualityHigh-quality100.000AAI-based (high-confidence) BruynoghevirusBruynoghevirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MH976506Gordonia phage Affeca5915667.454GordoniaGroup I VividuovirusVividuovirusSchenleyvirinaeStackebrandtviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Gordonia terrae 3612High-qualityHigh-quality100.000AAI-based (high-confidence) VividuovirusVividuovirus angelicageCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MH976507Gordonia phage Ailee5847467.505GordoniaGroup I VividuovirusVividuovirusSchenleyvirinaeStackebrandtviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Gordonia terrae 3612High-qualityHigh-quality99.190AAI-based (high-confidence) VividuovirusVividuovirus aileeCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MH976508Gordonia phage Bibwit5788067.457GordoniaGroup I VividuovirusVividuovirusSchenleyvirinaeStackebrandtviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Gordonia terrae 3612High-qualityHigh-quality98.260AAI-based (high-confidence) VividuovirusVividuovirus bibwitCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MH976509Gordonia phage Bizzy5731268.321GordoniaGroup I KroosvirusKroosvirusSchenleyvirinaeStackebrandtviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Gordonia terrae 3612High-qualityHigh-quality97.540AAI-based (high-confidence) KroosvirusKroosvirus bizzyThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
MH976510Gordonia phage Fosterous5913667.225GordoniaGroup I VividuovirusVividuovirusSchenleyvirinaeStackebrandtviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Gordonia terrae 3612High-qualityHigh-quality100.000AAI-based (high-confidence) VividuovirusVividuovirus fosterousCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MH976511Gordonia phage Gaea5747268.127GordoniaGroup I KroosvirusKroosvirusSchenleyvirinaeStackebrandtviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Gordonia terrae 3612High-qualityHigh-quality97.800AAI-based (high-confidence) KroosvirusKroosvirus gaeaThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
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