Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

Clear
Choose fields for download

37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MH926055Mycobacterium phage Chewbacca4357566.194MycobacteriumGroup I CharlievirusCharlievirusNclasvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality100.000AAI-based (high-confidence) CharlievirusCharlievirus PipsqueaksThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_36;immunity orf_37
MH926056Corynebacterium phage Cruella6671452.340CorynebacteriumGroup I CeetrepovirusCeetrepovirusToshachvirinaeZierdtviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Corynebacterium vitaeruminis NCIB 9291High-qualityHigh-quality99.100AAI-based (high-confidence) CeetrepovirusCeetrepovirus C3POCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MH926057Corynebacterium phage Kimchi17386691552.257CorynebacteriumGroup I CeetrepovirusCeetrepovirusToshachvirinaeZierdtviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Corynebacterium vitaeruminis NCIB 9291High-qualityHigh-quality99.430AAI-based (high-confidence) CeetrepovirusCeetrepovirus kimchi1738Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MH926058Mycobacterium phage Reptar30005460167.579MycobacteriumGroup I FionnbharthvirusFionnbharthvirusWeiservirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality95.100AAI-based (high-confidence) FionnbharthvirusFionnbharthvirus pattCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_42;immunity orf_44
MH926059Mycobacterium phage Riparian7119955.976MycobacteriumGroup I PapyrusvirusPapyrusvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality99.230AAI-based (high-confidence) PapyrusvirusPapyrusvirus send513Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MH926061Corynebacterium phage Troy4460968.143CorynebacteriumGroup I SamwavirusSamwavirusFrobishervirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Corynebacterium xerosisHigh-qualityHigh-quality100.000AAI-based (high-confidence) SamwavirusSamwavirus samWCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_26
MH929319Serratia phage vB_SmaA_3M15939851.414SerratiaGroup I MiltonvirusMiltonvirusUnclassifiedAckermannviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Serratia marcescens 2170High-qualityHigh-quality99.930AAI-based (high-confidence) MiltonvirusMiltonvirus 3MCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MH931003Termite gut associated microvirus 1489846.978UnspecifiedGroup II UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedMicroviricetesPhixviricotaSangerviraeFloreoviria Coptotermes formosanusHigh-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingsunknown
MH931004Termite gut associated microvirus 2463745.913UnspecifiedGroup II UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedMicroviricetesPhixviricotaSangerviraeFloreoviria Coptotermes formosanusHigh-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingsunknown
MH937457Streptococcus phage CHPC12483838339.510StreptococcusGroup I BrussowvirusBrussowvirusUnclassifiedAliceevansviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus thermophilusHigh-qualityHigh-quality100.000AAI-based (high-confidence) BrussowvirusBrussowvirus CHPC1248The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateantirepressor orf_32;cro orf_35
Previous Page 918 of 3739 Next