Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MH892383Streptococcus phage SW313658739.238StreptococcusGroup I BrussowvirusBrussowvirusUnclassifiedAliceevansviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus thermophilusHigh-qualityHigh-quality95.790AAI-based (high-confidence) BrussowvirusBrussowvirus SW13The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateantirepressor orf_29
MH892384Streptococcus phage SW323658739.238StreptococcusGroup I BrussowvirusBrussowvirusUnclassifiedAliceevansviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus thermophilusHigh-qualityHigh-quality95.790AAI-based (high-confidence) BrussowvirusBrussowvirus SW13The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateantirepressor orf_29
MH892385Streptococcus phage SW333658739.238StreptococcusGroup I BrussowvirusBrussowvirusUnclassifiedAliceevansviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus thermophilusHigh-qualityHigh-quality95.790AAI-based (high-confidence) BrussowvirusBrussowvirus SW13The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateantirepressor orf_29
MH898687Edwardsiella phage Edno54084450.803EdwardsiellaGroup I GofduovirusGofduovirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Edwardsiella anguillarum EA011113High-qualityHigh-quality97.690AAI-based (high-confidence) GofduovirusGofduovirus edno5Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_33;antirepressor orf_50
MH899585Klebsiella phage Pylas7040841.213KlebsiellaGroup I PylasvirusPylasvirusHumphriesvirinaeSchitoviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniaeHigh-qualityHigh-quality98.920AAI-based (high-confidence) PylasvirusPylasvirus pylasCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MH910038Mycobacterium phage LeMond6251568.766MycobacteriumGroup I AnayavirusAnayavirusWeiservirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality100.000AAI-based (high-confidence) AnayavirusAnayavirus kisiThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_44;immunity orf_46
MH910039Mycobacterium phage Oscar6243768.764MycobacteriumGroup I AnayavirusAnayavirusWeiservirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality100.000AAI-based (high-confidence) AnayavirusAnayavirus kisiThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_44;immunity orf_46
MH910040Mycobacterium phage Sauce15655464.721MycobacteriumGroup I BixzunavirusBixzunavirusCeeclamvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality98.130AAI-based (high-confidence) BixzunavirusBixzunavirus sauceCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MH910041Arthrobacter phage Seahorse5648162.697ArthrobacterGroup I SeamegvirusSeamegvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Arthrobacter globiformis NRRL B-2979 SEAHigh-qualityHigh-quality100.000AAI-based (high-confidence) SeamegvirusSeamegvirus seahorseCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_36;integrase orf_40
MH910042Mycobacterium phage Scarlett6230668.745MycobacteriumGroup I AnayavirusAnayavirusWeiservirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality100.000AAI-based (high-confidence) AnayavirusAnayavirus kisiThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_44;immunity orf_46
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