Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MH791414Aeromonas phage Aswh_122973038.370AeromonasGroup I IshigurovirusIshigurovirusEmmerichvirinaeStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Aeromonas salmonicidaHigh-qualityHigh-quality97.620AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
MH791415Enterococcus phage EfsWh-15803639.849EnterococcusGroup I SaphexavirusSaphexavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Enterococcus faecalisHigh-qualityHigh-quality100.000AAI-based (high-confidence) SaphexavirusSaphexavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MH791416Pseudomonas phage PaSzW-19431549.364PseudomonasGroup I PakpunavirusPakpunavirusSkurskavirinaeVandenendeviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosa PAO1High-qualityHigh-quality100.000AAI-based (high-confidence) PakpunavirusPakpunavirus PaZq1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperatecro orf_137
MH800198Acinetobacter phage vB_AbaM_B09_Aci01-110362837.186AcinetobacterGroup I SaclayvirusSaclayvirusUnclassifiedLuriaviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Acinetobacter baumanniiCompleteHigh-quality100.000DTR (high-confidence) SaclayvirusSaclayvirus Aci011Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MH800199Acinetobacter phage vB_AbaM_B09_Aci02-210435437.182AcinetobacterGroup I SaclayvirusSaclayvirusUnclassifiedLuriaviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Acinetobacter baumanniiCompleteHigh-quality100.000DTR (high-confidence) SaclayvirusSaclayvirus Aci022Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MH800200Acinetobacter phage vB_AbaP_46-62_Aci074233039.135AcinetobacterGroup I FriunavirusFriunavirusBeijerinckvirinaeAutoscriptoviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Acinetobacter baumanniiCompleteHigh-quality100.000DTR (high-confidence) FriunavirusFriunavirus Aci07Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MH807810Dickeya phage Dagda_B14048448.113DickeyaGroup I AarhusvirusAarhusvirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Dickeya solani DSM28711High-qualityHigh-quality99.760AAI-based (high-confidence) AarhusvirusAarhusvirus dagdaCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MH807811Pectobacterium phage Gaspode4436448.808PectobacteriumGroup I PhimunavirusPhimunavirusCorkvirinaeAutoscriptoviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pectobacterium atrosepticum DSM18077High-qualityHigh-quality100.000AAI-based (high-confidence) PhimunavirusPhimunavirus gaspodeCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MH807812Dickeya phage Kamild15261249.168DickeyaGroup I LimestonevirusLimestonevirusAglimvirinaeAckermannviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Dickeya solani DSM28711High-qualityHigh-quality96.640AAI-based (high-confidence) LimestonevirusLimestonevirus limestoneThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
MH807813Dickeya phage Katbat4044148.038DickeyaGroup I AarhusvirusAarhusvirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Dickeya solani DSM28711High-qualityHigh-quality99.650AAI-based (high-confidence) AarhusvirusAarhusvirus katbatCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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