Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MH807814Pectobacterium phage Lelidair4368648.659PectobacteriumGroup I PhimunavirusPhimunavirusCorkvirinaeAutoscriptoviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pectobacterium atrosepticum DSM18077High-qualityHigh-quality99.110AAI-based (high-confidence) PhimunavirusPhimunavirus lelidairCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MH807815Dickeya phage Luksen4072948.214DickeyaGroup I AarhusvirusAarhusvirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Dickeya solani DSM28711High-qualityHigh-quality100.000AAI-based (high-confidence) AarhusvirusAarhusvirus luksenCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MH807816Pectobacterium phage Momine4340249.039PectobacteriumGroup I PhimunavirusPhimunavirusCorkvirinaeAutoscriptoviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pectobacterium atrosepticum DSM18077High-qualityHigh-quality98.470AAI-based (high-confidence) PhimunavirusPhimunavirus kootCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MH807817Dickeya phage Mysterion4065148.110DickeyaGroup I AarhusvirusAarhusvirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Dickeya solani DSM28711High-qualityHigh-quality100.000AAI-based (high-confidence) AarhusvirusAarhusvirus mysterionCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MH807818Pectobacterium phage Nobby4281848.996PectobacteriumGroup I PhimunavirusPhimunavirusCorkvirinaeAutoscriptoviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pectobacterium atrosepticum DSM18077High-qualityHigh-quality97.140AAI-based (high-confidence) PhimunavirusPhimunavirus nobbyCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MH807819Pectobacterium phage Slant4414948.957PectobacteriumGroup I PhimunavirusPhimunavirusCorkvirinaeAutoscriptoviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pectobacterium atrosepticum DSM18077High-qualityHigh-quality100.000AAI-based (high-confidence) PhimunavirusPhimunavirus khlenCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MH807820Dickeya phage Coodle15251549.132DickeyaGroup I LimestonevirusLimestonevirusAglimvirinaeAckermannviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Dickeya solani DSM28711High-qualityHigh-quality96.590AAI-based (high-confidence) LimestonevirusLimestonevirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
MH809528Lactobacillus phage Sabazios3884342.664LactobacillusGroup I CoetzeevirusCoetzeevirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Lactobacillus plantarumHigh-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
MH809529Lactobacillus phage Iacchus13797336.505LactobacillusGroup I HarbinvirusHarbinvirusUnclassifiedHerelleviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Lactobacillus plantarumHigh-qualityHigh-quality97.850AAI-based (high-confidence) HarbinvirusHarbinvirus iacchusCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateantirepressor orf_140
MH809530Lactobacillus phage Dionysus14134436.640LactobacillusGroup I HarbinvirusHarbinvirusUnclassifiedHerelleviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Lactobacillus plantarumHigh-qualityHigh-quality100.000AAI-based (high-confidence) HarbinvirusHarbinvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateantirepressor orf_142
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