INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
MT611523	Escherichia phage DK-13	172275	40.178	Escherichia	Group I	Gaprivervirus	Gaprivervirus	Tevenvirinae	Straboviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli	High-quality	High-quality	100.000	AAI-based (high-confidence)	Gaprivervirus	Gaprivervirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT612988	Vibrio phage vB_ValM_R10Z	247167	41.295	Vibrio	Group I	Schizotequatrovirus	Schizotequatrovirus	Unclassified	Straboviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Vibrio alginolyticus NBRC 15630 = ATCC 17749	High-quality	High-quality	92.760	AAI-based (high-confidence)	Schizotequatrovirus	Schizotequatrovirus vh7d	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT612989	Vibrio phage vB_ValM_R11Z	246831	41.332	Vibrio	Group I	Schizotequatrovirus	Schizotequatrovirus	Unclassified	Straboviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Vibrio alginolyticus NBRC 15630 = ATCC 17749	High-quality	High-quality	92.650	AAI-based (high-confidence)	Schizotequatrovirus	Schizotequatrovirus vh7d	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT613935	Pseudomonas phage Persinger	44033	62.860	Pseudomonas	Group I	Harrisonburgvirus	Harrisonburgvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pseudomonas aeruginosa UVA4	High-quality	High-quality	100.000	AAI-based (high-confidence)	Harrisonburgvirus	Harrisonburgvirus persinger	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_43
MT623546	Acinetobacter phage Ab_121	102499	37.203	Acinetobacter	Group I	Saclayvirus	Saclayvirus	Unclassified	Luriaviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Acinetobacter baumannii	Complete	High-quality	100.000	DTR (high-confidence)	Saclayvirus	Saclayvirus Ab121	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT623578	Aeromonas phage PVN02	51668	52.452	Aeromonas	Group I	Pahsextavirus	Pahsextavirus	Nefertitivirinae	Chaseviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Aeromonas hydrophila 4.4T	Complete	High-quality	100.000	DTR (high-confidence)	Phayathaivirus	Phayathaivirus pAh62TG	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
MT625440	Enterobacter phage PZJ0206	40526	48.623	Enterobacter	Group I	Berlinvirus	Berlinvirus	Studiervirinae	Autotranscriptaviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Enterobacter cloacae ZJ0206	Complete	High-quality	100.000	DTR (high-confidence)	Berlinvirus	Berlinvirus PZJ0206	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT627482	Enterococcus phage vB_EFaS_TV217	41486	34.578	Enterococcus	Group I	Efquatrovirus	Efquatrovirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Enterococcus faecalis ATCC 29212	High-quality	High-quality	100.000	AAI-based (high-confidence)	Efquatrovirus	Efquatrovirus SHEF2	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT630408	Enterobacteria phage phiC600P9	164691	35.621	Enterobacteria	Group I	Tequatrovirus	Tequatrovirus	Tevenvirinae	Straboviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli C600	High-quality	High-quality	98.070	AAI-based (high-confidence)	Tequatrovirus	Tequatrovirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT630433	Bacteroides phage vB_BfrS_23	48011	38.566	Bacteroides	Group I	Gotuavirus	Gotuavirus	Cardingvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Bacteroides fragilis GB124	High-quality	High-quality	100.000	AAI-based (high-confidence)	Gotuavirus	Gotuavirus gv23	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	antirepressor orf_67