Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MT596503Staphylococcus phage vB_SepM_BE0614065927.992StaphylococcusGroup I SepunavirusSepunavirusTwortvirinaeHerelleviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Staphylococcus epidermidis F12CompleteHigh-quality100.000DTR (high-confidence) SepunavirusSepunavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MT596504Staphylococcus phage vB_SepM_BE0714066127.991StaphylococcusGroup I SepunavirusSepunavirusTwortvirinaeHerelleviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Staphylococcus epidermidis F12CompleteHigh-quality100.000DTR (high-confidence) SepunavirusSepunavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MT596505Staphylococcus phage vB_SepM_BE0814065928.019StaphylococcusGroup I SepunavirusSepunavirusTwortvirinaeHerelleviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Staphylococcus epidermidis F12CompleteHigh-quality100.000DTR (high-confidence) SepunavirusSepunavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MT596506Staphylococcus phage vB_SepM_BE0914066828.018StaphylococcusGroup I SepunavirusSepunavirusTwortvirinaeHerelleviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Staphylococcus epidermidis F12CompleteHigh-quality100.000DTR (high-confidence) SepunavirusSepunavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MT597419Pseudomonas phage vB_PsyP_3MF54160856.528PseudomonasGroup I WarsawvirusWarsawvirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas syringae isolate 3MCompleteHigh-quality100.000DTR (high-confidence) WarsawvirusWarsawvirus wv3MF5Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MT601270Bacillus phage vB_BsuM-Goe915096140.355BacillusGroup I OkubovirusOkubovirusSpounavirinaeHerelleviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Bacillus subtilis Delta6CompleteHigh-quality100.000DTR (high-confidence) OkubovirusOkubovirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MT601271Bacillus phage vB_BsuM-Goe1014953940.351BacillusGroup I OkubovirusOkubovirusSpounavirinaeHerelleviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Bacillus subtilis Delta6CompleteHigh-quality100.000DTR (high-confidence) OkubovirusOkubovirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MT601272Bacillus phage vB_BsuS-Goe1112628834.913BacillusGroup I SpbetavirusSpbetavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Bacillus subtilis Delta6High-qualityHigh-quality99.250AAI-based (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancetemperateintegrase orf_29
MT601273Bacillus phage vB_BsuS-Goe1212428734.797BacillusGroup I SpbetavirusSpbetavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Bacillus subtilis Delta6High-qualityHigh-quality97.720AAI-based (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancetemperateintegrase orf_1;integrase orf_27
MT601274Bacillus phage vB_BsuS-Goe1312684834.788BacillusGroup I SpbetavirusSpbetavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Bacillus subtilis Delta6High-qualityHigh-quality99.410AAI-based (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancetemperateintegrase orf_1;integrase orf_27;antirepressor orf_98
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