Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MT632017Salmonella phage UPWr_S24248750.025SalmonellaGroup I JerseyvirusJerseyvirusGuernseyvirinaeSarkviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella enterica subsp. enterica serovar EnteritidisCompleteHigh-quality100.000DTR (high-confidence) JerseyvirusJerseyvirus sidsteCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MT632018Salmonella phage UPWr_S34261850.012SalmonellaGroup I JerseyvirusJerseyvirusGuernseyvirinaeSarkviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella enterica subsp. enterica serovar EnteritidisCompleteHigh-quality100.000DTR (high-confidence) JerseyvirusJerseyvirus sidsteCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MT632019Salmonella phage UPWr_S44250650.019SalmonellaGroup I JerseyvirusJerseyvirusGuernseyvirinaeSarkviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella enterica subsp. enterica serovar EnteritidisCompleteHigh-quality100.000DTR (high-confidence) JerseyvirusJerseyvirus sidsteCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MT632020Salmonella phage UPWr_S54360049.989SalmonellaGroup I JerseyvirusJerseyvirusGuernseyvirinaeSarkviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella enterica subsp. enterica serovar EnteritidisCompleteHigh-quality100.000DTR (high-confidence) JerseyvirusJerseyvirus VSe103Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MT633129Acinetobacter phage Ab1244047139.505AcinetobacterGroup I FriunavirusFriunavirusBeijerinckvirinaeAutoscriptoviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Acinetobacter baumannii b1928040CompleteHigh-quality100.000DTR (high-confidence) FriunavirusFriunavirus fv15519Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MT635598Bacteroides phage Bacuni_F14042151.750BacteroidesGroup I MariborvirusMariborvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Bacteroides sp.High-qualityHigh-quality100.000AAI-based (high-confidence) MariborvirusMariborvirus bacuniF1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MT639639Gordonia phage LittleFella6435160.184GordoniaGroup I TerapinvirusTerapinvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Gordonia terrae 3612High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
MT639640Gordonia phage Paries6012767.354GordoniaGroup I VividuovirusVividuovirusSchenleyvirinaeStackebrandtviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Gordonia terrae NRRL B-16283High-qualityHigh-quality100.000AAI-based (high-confidence) VividuovirusVividuovirus pariesCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MT639641Microbacterium phage Phinky6306467.357MicrobacteriumGroup I SquashvirusSquashvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Microbacterium foliorum NRRL B-24224 SEACompleteHigh-quality100.000DTR (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancetemperateintegrase orf_23
MT639642Microbacterium phage YertPhresh1736268.512MicrobacteriumGroup I PaopuvirusPaopuvirusPelczarvirinaeOrlajensenviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Microbacterium foliorum NRRL B-24224 SEAHigh-qualityHigh-quality99.780AAI-based (high-confidence) PaopuvirusPaopuvirus paopuCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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