INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| MK947460 | Salmonella phage vB_SenS_SB28 | 45126 | 46.164 | Salmonella | Group I | Macdonaldcampvirus | Macdonaldcampvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Salmonella enterica subsp. enterica serovar Typhi T42 DEF 472 | High-quality | High-quality | 96.380 | AAI-based (high-confidence) | Macdonaldcampvirus | Macdonaldcampvirus SB28 | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | lytic | |
| MK962626 | Achromobacter phage vB_AxyP_19-32_Axy04 | 73834 | 54.934 | Achromobacter | Group I | Dongdastvirus | Dongdastvirus | Rothmandenesvirinae | Schitoviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Achromobacter xylosoxidans I2BC | Complete | High-quality | 100.000 | DTR (high-confidence) | Dongdastvirus | Dongdastvirus Axy04 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MK962627 | Achromobacter phage vB_AxyS_19-32_Axy06 | 45830 | 56.295 | Achromobacter | Group I | Nyaakvirus | Nyaakvirus | Alvaradovirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Achromobacter xylosoxidans I2BC | Medium-quality | Genome-fragment | 85.980 | AAI-based (high-confidence) | Nyaakvirus | Nyaakvirus Axy06 | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | lytic | |
| MK962628 | Achromobacter phage vB_AxyP_19-32_Axy09 | 43287 | 64.322 | Achromobacter | Group I | Axyvirus | Axyvirus | Unclassified | Autoscriptoviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Achromobacter xylosoxidans I2BC | Complete | High-quality | 100.000 | DTR (high-confidence) | Axyvirus | Axyvirus 1932Axy09 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MK962629 | Achromobacter phage vB_AxyP_19-32_Axy10 | 73898 | 54.269 | Achromobacter | Group I | Pourcelvirus | Pourcelvirus | Rothmandenesvirinae | Schitoviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Achromobacter xylosoxidans I2BC | Complete | High-quality | 100.000 | DTR (high-confidence) | Pourcelvirus | Pourcelvirus Axy10 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MK962630 | Achromobacter phage vB_AxyP_19-32_Axy11 | 73413 | 54.324 | Achromobacter | Group I | Pourcelvirus | Pourcelvirus | Rothmandenesvirinae | Schitoviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Achromobacter xylosoxidans I2BC | Complete | High-quality | 100.000 | DTR (high-confidence) | Pourcelvirus | Pourcelvirus Axy11 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MK962631 | Achromobacter phage vB_AxyP_19-32_Axy12 | 74096 | 55.038 | Achromobacter | Group I | Dongdastvirus | Dongdastvirus | Rothmandenesvirinae | Schitoviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Achromobacter xylosoxidans I2BC | Complete | High-quality | 100.000 | DTR (high-confidence) | Dongdastvirus | Dongdastvirus Axy12 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MK962632 | Achromobacter phage vB_AxyP_19-32_Axy13 | 70103 | 55.839 | Achromobacter | Group I | Inbricusvirus | Inbricusvirus | Rothmandenesvirinae | Schitoviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Achromobacter xylosoxidans I2BC | Complete | High-quality | 100.000 | DTR (high-confidence) | Inbricusvirus | Inbricusvirus inbricus | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MK962633 | Achromobacter phage vB_AxyS_19-32_Axy14 | 46703 | 54.973 | Achromobacter | Group I | Nyaakvirus | Nyaakvirus | Alvaradovirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Achromobacter xylosoxidans I2BC | Medium-quality | Genome-fragment | 87.220 | AAI-based (high-confidence) | Nyaakvirus | Nyaakvirus Axy14 | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | lytic | |
| MK962634 | Achromobacter phage vB_AxyS_19-32_Axy16 | 46178 | 56.206 | Achromobacter | Group I | Steinhofvirus | Steinhofvirus | Alvaradovirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Achromobacter xylosoxidans I2BC | Medium-quality | Genome-fragment | 86.530 | AAI-based (high-confidence) | Nyaakvirus | Nyaakvirus maay | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | lytic |