INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Create interactive summaries of genome metadata and download the resulting figures.

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Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

Host (NCBI)

Family (NCBI)

Genus (TaxMyPhage)

CheckV quality

PhageLeads lifestyle

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
PZ481234	Staphylococcus phage BWPh072	133953	30.460	Staphylococcus	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Staphylococcus epidermidis 72	High-quality	High-quality	94.600	AAI-based (high-confidence)	Kayvirus	Kayvirus G1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PZ481233	Staphylococcus phage BWPh069	137985	29.897	Staphylococcus	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Staphylococcus aureus 69	High-quality	High-quality	100.000	AAI-based (high-confidence)	Silviavirus	Silviavirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_120
PZ481232	Staphylococcus phage BWPh068	134016	30.443	Staphylococcus	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Staphylococcus aureus 68	High-quality	High-quality	94.640	AAI-based (high-confidence)	Kayvirus	Kayvirus G1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PZ481231	Staphylococcus phage BWPh066	133380	30.456	Staphylococcus	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Staphylococcus aureus 66	High-quality	High-quality	94.190	AAI-based (high-confidence)	Kayvirus	Kayvirus G1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PZ481230	Staphylococcus phage BWPh055	138319	29.907	Staphylococcus	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Staphylococcus aureus 55	Complete	High-quality	100.000	DTR (high-confidence)	Silviavirus	Silviavirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_120
PZ481229	Staphylococcus phage BWPh054	133810	30.439	Staphylococcus	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Staphylococcus aureus 54	High-quality	High-quality	94.500	AAI-based (high-confidence)	Kayvirus	Kayvirus G1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PZ481228	Staphylococcus phage BWPh053	140143	30.405	Staphylococcus	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Staphylococcus aureus 53	Complete	High-quality	100.000	DTR (high-confidence)	Kayvirus	Kayvirus G1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PZ481227	Staphylococcus phage BWPh050	140313	30.386	Staphylococcus	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Staphylococcus aureus 50	Complete	High-quality	100.000	DTR (high-confidence)	Kayvirus	Kayvirus G1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PZ481226	Staphylococcus phage BWPh048	140598	30.397	Staphylococcus	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Staphylococcus aureus 48	Complete	High-quality	100.000	DTR (high-confidence)	Kayvirus	Kayvirus G1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PZ481225	Staphylococcus phage BWPh042	138354	29.907	Staphylococcus	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Staphylococcus aureus 42	Complete	High-quality	100.000	DTR (high-confidence)	Silviavirus	Silviavirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_120