Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
PP579744Bacillus phage KKP_404915402938.971BacillusGroup I SiophivirusSiophivirusBastillevirinaeHerelleviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Bacillus licheniformis KKP_3876CompleteHigh-quality100.000DTR (high-confidence) SiophivirusSiophivirus SIOphiCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PP579743Bacillus phage KKP_404815210639.012BacillusGroup I SiophivirusSiophivirusBastillevirinaeHerelleviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Bacillus licheniformis KKP_3373CompleteHigh-quality100.000DTR (high-confidence) SiophivirusSiophivirus SIOphiCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PP579742Bacillus phage KKP_404715211039.011BacillusGroup I SiophivirusSiophivirusBastillevirinaeHerelleviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Bacillus licheniformis KKP_3373CompleteHigh-quality100.000DTR (high-confidence) SiophivirusSiophivirus SIOphiCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PP579741Kononvirus KKP371111371137.823UnspecifiedGroup I KononvirusKononvirusMarkadamsvirinaeDemerecviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Enterobacter sp. KKP_3684High-qualityHigh-quality100.000AAI-based (high-confidence) KononvirusKononvirus KKP3711Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PP573285Pseudomonas phage vB_PaeP_SIIA-P24527652.500PseudomonasGroup I BruynoghevirusBruynoghevirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosa 7-61-29High-qualityHigh-quality99.840AAI-based (high-confidence) BruynoghevirusBruynoghevirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PP566237Klebsiella phage vB_XU-P14391754.072KlebsiellaGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella sp.High-qualityHigh-quality100.000AAI-based (high-confidence) DrulisvirusDrulisvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PP566124Dickeya phage BIM BV-994024657.039DickeyaGroup I GhunavirusGhunavirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Dickeya dadantii BIM B-921CompleteHigh-quality100.000DTR (high-confidence) GhunavirusGhunavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PP565371Klebsiella phage vB_CRKPVQ_229307341.799KlebsiellaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Klebsiella pneumoniae (carbapenem-resistant)Medium-qualityGenome-fragment52.320AAI-based (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancelytic
PP558327Escherichia phage FCWL14933645.403EscherichiaGroup I TunavirusTunavirusTunavirinaeDrexlerviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coli BL21(DE3) plysSHigh-qualityHigh-quality98.510AAI-based (high-confidence) TunavirusTunavirus SH2Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PP558219Roseobacter phage CRPss-251582844.235RoseobacterGroup II OceanivirusOceanivirusUnclassifiedChicoviridaeSecretviralesMicroviricetesPhixviricotaSangerviraeFloreoviria Roseobacter sp. FZCC0040High-qualityHigh-quality100.000AAI-based (medium-confidence) New_genusNew_speciesNo hits were found with the default settingsunknown
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