Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
PP695294Salmonella phage 125224322948.523SalmonellaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Salmonella enterica subsp. enterica serovar EnteritidisCompleteHigh-quality100.000DTR (high-confidence) SeoulvirusSeoulvirus SPN3USCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateantirepressor orf_23
PP693361Propionibacterium phage Philemon580264.374PropionibacteriumGroup II BifilivirusBifilivirusUnclassifiedPaulinoviridaeTubulaviralesFaserviricetesHofneiviricotaLoebviraeFloreoviria Propionibacterium freudenreichiiMedium-qualityGenome-fragment78.320AAI-based (medium-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
PP693301Yersinia phage vB_YenM_P817147740.251YersiniaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Yersinia enterocoliticaHigh-qualityHigh-quality100.000AAI-based (high-confidence) GaprivervirusGaprivervirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PP693300Yersinia phage vB_YenM_P7789010641.827YersiniaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Yersinia enterocoliticaHigh-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
PP693299Yersinia phage vB_YenM_P7444240140.034YersiniaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Yersinia enterocoliticaHigh-qualityHigh-quality95.590AAI-based (medium-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
PP693230Salmonella phage DS_BP23903049.011SalmonellaGroup I BerlinvirusBerlinvirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella sp.High-qualityHigh-quality97.660AAI-based (high-confidence) BerlinvirusBerlinvirus SalMLPST153Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PP681324Microcystis phage MaMV-DL0217721245.438MicrocystisGroup I FukuivirusFukuivirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Microcystis aeruginosa FACHB524High-qualityHigh-quality100.000AAI-based (high-confidence) FukuivirusFukuivirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateantirepressor orf_9;antirepressor orf_25
PP681323Microcystis phage MaMV-DL0117721345.436MicrocystisGroup I FukuivirusFukuivirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Microcystis aeruginosa FACHB524High-qualityHigh-quality100.000AAI-based (high-confidence) FukuivirusFukuivirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateantirepressor orf_9;antirepressor orf_25
PP681322Microcystis phage MaMV-CH0217278945.676MicrocystisGroup I FukuivirusFukuivirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Microcystis aeruginosa FACHB524High-qualityHigh-quality100.000AAI-based (high-confidence) FukuivirusFukuivirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateantirepressor orf_9;integrase orf_189
PP681321Microcystis phage MaMV-CH0117143745.652MicrocystisGroup I FukuivirusFukuivirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Microcystis aeruginosa FACHB524High-qualityHigh-quality100.000AAI-based (high-confidence) FukuivirusFukuivirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateantirepressor orf_9;integrase orf_191
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