Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
PP681140Enterobacter phage EC15214827746.342EnterobacterGroup I SeunavirusSeunavirusVequintavirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Enterobacter cloacae CEMTC2064High-qualityHigh-quality99.840AAI-based (high-confidence) SeunavirusSeunavirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
PP680570Enterococcus phage VRE9_413407031.620EnterococcusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Enterococcus faeciumHigh-qualityHigh-quality100.000AAI-based (high-confidence) EfunavirusEfunavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PP680569Enterococcus phage VRE9_313774831.800EnterococcusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Enterococcus faeciumHigh-qualityHigh-quality100.000AAI-based (high-confidence) EfunavirusEfunavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PP680568Enterococcus phage VRE9_214025731.250EnterococcusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Enterococcus faeciumHigh-qualityHigh-quality100.000AAI-based (high-confidence) EfunavirusEfunavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PP680567Enterococcus phage VRE9_114026931.246EnterococcusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Enterococcus faeciumHigh-qualityHigh-quality100.000AAI-based (high-confidence) EfunavirusEfunavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PP668090Pseudomonas phage vB_PaeM_M12PA6638855.459PseudomonasGroup I PbunavirusPbunavirusUnclassifiedLindbergviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosa ATCC 15442High-qualityHigh-quality100.000AAI-based (high-confidence) PbunavirusPbunavirus PaGU11Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PP663284Klebsiella phage vB_Kpn_Y1P45041250.597KlebsiellaGroup I WebervirusWebervirusUnclassifiedDrexlerviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniae CRKP-P4 (carbapenem-resistant)High-qualityHigh-quality100.000AAI-based (high-confidence) WebervirusWebervirus BUCT705Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PP663283Klebsiella phage vB_Kp_XP44434453.969KlebsiellaGroup I DrulisvirusDrulisvirusSlopekvirinaeAutoscriptoviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniae CRKP-P4 (carbapenem-resistant)High-qualityHigh-quality100.000AAI-based (high-confidence) DrulisvirusDrulisvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PP662633Klebsiella phage YMR24075653.055KlebsiellaGroup I PrzondovirusPrzondovirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniae NCCP 15864High-qualityHigh-quality100.000AAI-based (high-confidence) PrzondovirusPrzondovirus W14TH13021Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PP662632Klebsiella phage YMR14033853.282KlebsiellaGroup I PrzondovirusPrzondovirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniae NCCP 16126High-qualityHigh-quality100.000AAI-based (high-confidence) PrzondovirusPrzondovirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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