Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
PV948781Enterococcus phage vB_SEF_85797439.930EnterococcusUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Enterococcus faecalis BM8High-qualityHigh-quality100.000AAI-based (high-confidence) SaphexavirusSaphexavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PV948520Klebsiella phage LAL02316965539.312KlebsiellaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Klebsiella pneumoniae ATCC 700603High-qualityHigh-quality100.000AAI-based (high-confidence) JiaodavirusJiaodavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PV946991Salmonella phage Artin11847739.778SalmonellaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Salmonella enterica subsp. enterica serovar Typhimurium ATCC 25241High-qualityHigh-quality100.000AAI-based (high-confidence) EpseptimavirusEpseptimavirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
PV946933Escherichia phage vB_EcoM_5116701635.544EscherichiaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Escherichia coli (multidrug-resistant)CompleteHigh-quality100.000DTR (high-confidence) TequatrovirusTequatrovirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PV945455Enterococcus phage vB_Edu_21C115074537.160EnterococcusGroup I SchiekvirusSchiekvirusBrockvirinaeHerelleviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Enterococcus sp.High-qualityHigh-quality98.810AAI-based (high-confidence) SchiekvirusSchiekvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PV942687Erwinia phage RF14627249.211ErwiniaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Erwinia amylovora NCPPB 2080High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
PV941774Lactococcus phage V2-MF82982335.251LactococcusGroup I SkunavirusSkunavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Lactococcus cremorisHigh-qualityHigh-quality98.360AAI-based (high-confidence) SkunavirusSkunavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PV941773Lactococcus phage V2-MB63027934.664LactococcusGroup I SkunavirusSkunavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Lactococcus cremorisHigh-qualityHigh-quality99.850AAI-based (high-confidence) SkunavirusSkunavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PV941772Lactococcus phage V1-MA63034634.845LactococcusGroup I SkunavirusSkunavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Lactococcus cremorisHigh-qualityHigh-quality100.000AAI-based (high-confidence) SkunavirusSkunavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PV941771Lactococcus phage T1-MH42900235.256LactococcusGroup I SkunavirusSkunavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Lactococcus cremorisHigh-qualityHigh-quality95.600AAI-based (high-confidence) SkunavirusSkunavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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