INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▼ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PX111316 | Acinetobacter phage Cornice | 104237 | 37.491 | Acinetobacter | Group I | Saclayvirus | Saclayvirus | Unclassified | Luriaviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Acinetobacter baumannii MAR14-500 | Complete | High-quality | 100.000 | DTR (high-confidence) | Saclayvirus | Saclayvirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| PX109662 | Yersinia phage vB_Yen-18-YE00061 | 50559 | 46.625 | Yersinia | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Yersinia enterocolitica 18-YE00061 | High-quality | High-quality | 91.390 | AAI-based (medium-confidence) | New_genus | New_species | No hits were found with the default settings | temperate | integrase orf_1 |
| PX106863 | Pseudomonas phage Teros14 | 40532 | 57.268 | Pseudomonas | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Pseudomonas syringae pv. syringae | Complete | High-quality | 100.000 | DTR (high-confidence) | Ghunavirus | Ghunavirus AH05 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| PX105294 | Pseudomonas phage Teros21 | 40425 | 57.309 | Pseudomonas | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Pseudomonas syringae pv. syringae | High-quality | High-quality | 99.440 | AAI-based (high-confidence) | Ghunavirus | Ghunavirus CHF1 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| PX105073 | Burkholderia phage vB_HM962 | 37637 | 64.806 | Burkholderia | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Burkholderia pseudomallei | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Tigrvirus | Tigrvirus phi52237 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | integrase orf_46 |
| PX105072 | Burkholderia phage vB_HM916 | 44036 | 63.539 | Burkholderia | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Burkholderia pseudomallei | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | temperate | integrase orf_34 |
| PX105071 | Burkholderia phage vB_HM913 | 38557 | 64.541 | Burkholderia | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Burkholderia pseudomallei | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Tigrvirus | Tigrvirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | integrase orf_10 |
| PX105070 | Burkholderia phage vB_HM900 | 44036 | 63.539 | Burkholderia | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Burkholderia pseudomallei | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | temperate | integrase orf_34 |
| PX105069 | Burkholderia phage vB_HM479 | 37637 | 64.825 | Burkholderia | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Burkholderia pseudomallei | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Tigrvirus | Tigrvirus phi52237 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | integrase orf_46 |
| PX105068 | Burkholderia phage vB_HM471b | 36145 | 65.376 | Burkholderia | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Burkholderia pseudomallei | High-quality | High-quality | 96.380 | AAI-based (high-confidence) | Tigrvirus | Tigrvirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | integrase orf_42 |