INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Explore INPHARED2 data visually

Create interactive summaries of genome metadata and download the resulting figures.

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Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

Host (NCBI)

Family (NCBI)

Genus (TaxMyPhage)

CheckV quality

PhageLeads lifestyle

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
PX105067	Burkholderia phage vB_HM471a	38396	63.613	Burkholderia	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Burkholderia pseudomallei	Complete	High-quality	100.000	DTR (high-confidence)	Tigrvirus	Tigrvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_45
PX105066	Burkholderia phage vB_HM450	37637	64.811	Burkholderia	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Burkholderia pseudomallei	High-quality	High-quality	100.000	AAI-based (high-confidence)	Tigrvirus	Tigrvirus phi52237	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_46
PX105065	Burkholderia phage vB_HM217	36652	65.118	Burkholderia	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Burkholderia pseudomallei	High-quality	High-quality	97.720	AAI-based (high-confidence)	Tigrvirus	Tigrvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_11
PX105064	Burkholderia phage vB_HM195	37788	64.822	Burkholderia	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Burkholderia pseudomallei	High-quality	High-quality	100.000	AAI-based (high-confidence)	Tigrvirus	Tigrvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_46
PX105063	Burkholderia phage vB_CBP97	36798	64.881	Burkholderia	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Burkholderia pseudomallei	High-quality	High-quality	98.100	AAI-based (high-confidence)	Tigrvirus	Tigrvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_11
PX105062	Burkholderia phage vB_CBP90b	36429	64.575	Burkholderia	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Burkholderia pseudomallei	High-quality	High-quality	97.130	AAI-based (high-confidence)	Tigrvirus	Tigrvirus phi52237	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_10
PX105061	Burkholderia phage vB_CBP90a	36911	64.905	Burkholderia	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Burkholderia pseudomallei	High-quality	High-quality	98.400	AAI-based (high-confidence)	Tigrvirus	Tigrvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_45
PX105060	Burkholderia phage vB_CBP89	36396	65.323	Burkholderia	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Burkholderia pseudomallei	High-quality	High-quality	97.010	AAI-based (high-confidence)	Tigrvirus	Tigrvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_46
PX105059	Burkholderia phage vB_CBP70	36490	65.111	Burkholderia	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Burkholderia pseudomallei	High-quality	High-quality	97.330	AAI-based (high-confidence)	Tigrvirus	Tigrvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_11
PX105058	Burkholderia phage vB_CBP66	37597	64.838	Burkholderia	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Burkholderia pseudomallei	High-quality	High-quality	100.000	AAI-based (high-confidence)	Tigrvirus	Tigrvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_11