Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
PX907428Listeria phage LP-XY21014078035.549ListeriaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Listeria monocytogenes ATCC 19115CompleteHigh-quality100.000DTR (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancetemperateantirepressor orf_52
PX907427Escherichia phage vB_SEC_3608545.308EscherichiaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Escherichia coli 8432High-qualityHigh-quality99.940AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingsunknown
PX907404Escherichia phage Arnold5093544.643EscherichiaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Escherichia coliCompleteHigh-quality100.000DTR (high-confidence) WarwickvirusWarwickvirus ityhunaCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PX907403Escherichia phage Char3.1A4485654.497EscherichiaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Escherichia coliCompleteHigh-quality100.000DTR (high-confidence) DhillonvirusDhillonvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PX907402Escherichia phage Char4.1C4431754.514EscherichiaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Escherichia coliHigh-qualityHigh-quality99.100AAI-based (high-confidence) DhillonvirusDhillonvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PX907401Escherichia phage Char1o24400754.289EscherichiaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Escherichia coliCompleteHigh-quality100.000DTR (high-confidence) DhillonvirusDhillonvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PX907400Escherichia phage CUTI4331950.961EscherichiaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Escherichia coliHigh-qualityHigh-quality100.000AAI-based (high-confidence) KagunavirusKagunavirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
PX907368Aeromonas phage vB_AvS-B14978748.840AeromonasUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Aeromonas veronii B1High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
PX906587Klebsiella phage KP474739657.515KlebsiellaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Klebsiella quasipneumoniae subsp. quasipneumoniae KH1CompleteHigh-quality100.000DTR (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
PX906549Salmonella phage PST3224579545.830SalmonellaGroup I SkatevirusSkatevirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella entericaHigh-qualityHigh-quality97.540AAI-based (high-confidence) SkatevirusSkatevirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
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