Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
PX222958Liberibacter phage P-V1R1-41701635.308LiberibacterUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Candidatus Liberibacter asiaticus V1R1Low-qualityGenome-fragment40.840AAI-based (medium-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
PX222957Liberibacter phage P-V1R1-54050139.735LiberibacterUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Candidatus Liberibacter asiaticus V1R1High-qualityHigh-quality100.000AAI-based (medium-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_47
PX216937Escherichia phage HN64126848.212EscherichiaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Escherichia coliCompleteHigh-quality100.000DTR (high-confidence) BerlinvirusBerlinvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PX215758Acinetobacter phage vB_AbaS-StAb37941440.398AcinetobacterUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Acinetobacter baumannii MC47.2High-qualityHigh-quality96.600AAI-based (medium-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
PX215757Acinetobacter phage vB_AbaM-StAb216582936.716AcinetobacterUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Acinetobacter baumannii 398High-qualityHigh-quality99.170AAI-based (high-confidence) LazarusvirusLazarusvirus fhyacithreeCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PX215756Acinetobacter phage vB_AbaP-StAb14224739.506AcinetobacterUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Acinetobacter baumannii 398High-qualityHigh-quality100.000AAI-based (high-confidence) FriunavirusFriunavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PX210219Mycolicibacterium phage Jun1410865865.991MycolicibacteriumUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Mycolicibacterium fortuitum subsp. fortuitumHigh-qualityHigh-quality100.000AAI-based (medium-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
PX206436Klebsiella phage vB_KpnS_CHNYNDL116594139.619KlebsiellaGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniae ATCC 700603CompleteHigh-quality100.000DTR (high-confidence) JiaodavirusJiaodavirus jd18Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PX204804Salmonella phage vB_CECAV_0748764238.874SalmonellaGroup I FelixounavirusFelixounavirusOunavirinaeAndersonviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella enterica subps. enterica serovar Typhimurium var. CopenhagenHigh-qualityHigh-quality99.550AAI-based (high-confidence) FelixounavirusFelixounavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PX204803Salmonella phage vB_CECAV_0618751038.792SalmonellaGroup I FelixounavirusFelixounavirusOunavirinaeAndersonviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella enterica subps. enterica serovar TyphimuriumHigh-qualityHigh-quality99.390AAI-based (high-confidence) FelixounavirusFelixounavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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