INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▼ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_028901 | Escherichia phage slur05 | 43900 | 54.544 | Escherichia | Group I | Dhillonvirus | Dhillonvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Escherichia coli | High-quality | High-quality | 98.160 | AAI-based (high-confidence) | lytic | ||||
| NC_028900 | Lactococcus phage SL4 | 28144 | 34.967 | Lactococcus | Group I | Skunavirus | Skunavirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Lactococcus lactis SMQ-404 | High-quality | High-quality | 92.780 | AAI-based (high-confidence) | lytic | ||||
| NC_028899 | Ralstonia phage RSF1 | 222888 | 52.259 | Ralstonia | Group I | Chiangmaivirus | Chiangmaivirus | Unclassified | Chimalliviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Ralstonia solanacearum | High-quality | High-quality | 99.190 | AAI-based (high-confidence) | lytic | ||||
| NC_028898 | Mannheimia phage vB_MhM_587AP1 | 35764 | 42.062 | Mannheimia | Group I | Baylorvirus | Baylorvirus | Unclassified | Peduoviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mannheimia haemolytica 587A serotype A2 | High-quality | High-quality | 99.550 | AAI-based (high-confidence) | temperate | cro orf_35;cro orf_36;integrase orf_51 | |||
| NC_028897 | Mycobacterium phage Chadwick | 49421 | 59.786 | Mycobacterium | Group I | Benedictvirus | Benedictvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 97.400 | AAI-based (high-confidence) | temperate | integrase orf_26;immunity orf_62 | |||
| NC_028896 | Escherichia phage pro147 | 32675 | 50.742 | Escherichia | Group I | Peduovirus | Peduovirus | Unclassified | Peduoviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Escherichia coli DE048 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_42 | |||
| NC_028895 | Vibrio phage phi 3 | 116138 | 42.827 | Vibrio | Group I | Jesfedecavirus | Jesfedecavirus | Ermolyevavirinae | Demerecviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Vibrio cholerae 1051 | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| NC_028894 | Escherichia phage vB_EcoM_VR20 | 170336 | 40.445 | Escherichia | Group I | Gaprivervirus | Gaprivervirus | Tevenvirinae | Straboviridae | Pantevenvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Escherichia coli | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_028892 | Streptomyces phage Caliburn | 49949 | 66.194 | Streptomyces | Group I | Likavirus | Likavirus | Arquatrovirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptomyces griseus ATCC 10137 | High-quality | High-quality | 98.410 | AAI-based (high-confidence) | temperate | immunity orf_28;integrase orf_45 | |||
| NC_028890 | Bacillus phage TsarBomba | 162486 | 40.074 | Bacillus | Group I | Tsarbombavirus | Tsarbombavirus | Bastillevirinae | Herelleviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Bacillus thuringiensis subsp. kurstaki | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic |