Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
OQ383618Salmonella phage MET_P1_103_313158252.144SalmonellaGroup I PeduovirusPeduovirusUnclassifiedPeduoviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedHigh-qualityHigh-quality98.870AAI-based (high-confidence) PeduovirusPeduovirus P110331Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_5;integrase orf_13
OQ383328Mycobacterium phage Nix224489567.359MycobacteriumGroup I FishburnevirusFishburnevirusPclasvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycolicobacterium smegmatis mc2 155High-qualityHigh-quality91.610AAI-based (high-confidence) FishburnevirusFishburnevirus arib1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_29;immunity orf_30;antirepressor orf_33
OQ383327Mycobacterium phage LOCARD5350661.488MycobacteriumGroup I CheoctovirusCheoctovirusGracegardnervirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycolicobacterium smegmatis mc2 155High-qualityHigh-quality92.970AAI-based (high-confidence) CheoctovirusCheoctovirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateimmunity orf_36;integrase orf_38;cro orf_41
OQ383326Mycobacterium phage LOCV54445067.327MycobacteriumGroup I FishburnevirusFishburnevirusPclasvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycolicobacterium smegmatis mc2 155High-qualityHigh-quality90.700AAI-based (high-confidence) FishburnevirusFishburnevirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_30;immunity orf_31;antirepressor orf_34
OQ383325Mycobacterium phage LOCV44240267.240MycobacteriumGroup I FishburnevirusFishburnevirusPclasvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycolicobacterium smegmatis mc2 155Medium-qualityGenome-fragment86.530AAI-based (high-confidence) FishburnevirusFishburnevirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_29;immunity orf_30;antirepressor orf_33
OQ383324Mycobacterium phage LOCV34495167.313MycobacteriumGroup I FishburnevirusFishburnevirusPclasvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycolicobacterium smegmatis mc2 155High-qualityHigh-quality91.720AAI-based (high-confidence) FishburnevirusFishburnevirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_30;immunity orf_31;antirepressor orf_34
OQ383323Mycobacterium phage LOCV24394467.256MycobacteriumGroup I FishburnevirusFishburnevirusPclasvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155Medium-qualityGenome-fragment89.650AAI-based (high-confidence) FishburnevirusFishburnevirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateimmunity orf_29;antirepressor orf_32
OQ383322Mycobacterium phage LOCV14488567.285MycobacteriumGroup I FishburnevirusFishburnevirusPclasvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycolicobacterium smegmatis mc2 155High-qualityHigh-quality91.590AAI-based (high-confidence) FishburnevirusFishburnevirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_30;immunity orf_31;antirepressor orf_34
OQ383211Pseudomonas phage UF_RH69471555.329PseudomonasGroup I SamunavirusSamunavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosaHigh-qualityHigh-quality100.000AAI-based (high-confidence) SamunavirusSamunavirus SM1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_110
OQ378934Escherichia phage LH216725935.486EscherichiaGroup I TequatrovirusTequatrovirusTevenvirinaeStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coli GXXWH2CompleteHigh-quality100.000DTR (high-confidence) TequatrovirusTequatrovirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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