INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▼ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OQ411014 | Escherichia phage EJP2 | 349185 | 37.758 | Escherichia | Group I | Asteriusvirus | Asteriusvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Escherichia coli FORC82 | Complete | High-quality | 100.000 | DTR (high-confidence) | New_genus | New_species | No hits were found with the default settings | temperate | antirepressor orf_10 |
| OQ404738 | Klebsiella phage phi731 | 50237 | 50.923 | Klebsiella | Group I | Webervirus | Webervirus | Unclassified | Drexlerviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Klebsiella pneumoniae 52.145 K2 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Webervirus | Webervirus pK8 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OQ401624 | Roseobacter phage CRP-902 | 51954 | 45.502 | Roseobacter | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Roseobacter sp. FZCC0083 | High-quality | High-quality | 97.690 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| OQ401623 | Roseobacter phage CRP-901 | 53013 | 45.566 | Roseobacter | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Roseobacter sp. FZCC0083 | High-quality | High-quality | 99.650 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| OQ389126 | Ralstonia phage BOESR1 | 20501 | 57.900 | Ralstonia | Group I | Boesrvirus | Boesrvirus | Unclassified | Unclassified | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Ralstonia pseudosolanacearum (NCPPB 4694) | Low-quality | Genome-fragment | 49.550 | AAI-based (high-confidence) | New_genus | New_species | Query is a new genus and species. You could try running again with if you larger distance | temperate | integrase orf_3 |
| OQ383623 | Salmonella phage MET_P1_082_240 | 243224 | 48.487 | Salmonella | Group I | Seoulvirus | Seoulvirus | Unclassified | Chimalliviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Unspecified | High-quality | High-quality | 98.970 | AAI-based (high-confidence) | Seoulvirus | Seoulvirus SPN3US | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OQ383622 | Salmonella phage MET_P1_179_112 | 112001 | 38.953 | Salmonella | Group I | Tequintavirus | Tequintavirus | Markadamsvirinae | Demerecviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Unspecified | High-quality | High-quality | 99.080 | AAI-based (high-confidence) | Tequintavirus | Tequintavirus tv179112 | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | lytic | |
| OQ383621 | Salmonella phage MET_P1_137_112 | 112278 | 39.874 | Salmonella | Group I | Epseptimavirus | Epseptimavirus | Markadamsvirinae | Demerecviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Unspecified | High-quality | High-quality | 99.280 | AAI-based (high-confidence) | Epseptimavirus | Epseptimavirus METP1137112 | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | lytic | |
| OQ383620 | Salmonella phage MET_P1_100_107 | 106987 | 39.207 | Salmonella | Group I | Tequintavirus | Tequintavirus | Markadamsvirinae | Demerecviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Unspecified | High-quality | High-quality | 94.680 | AAI-based (high-confidence) | Tequintavirus | Tequintavirus P1100107 | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | lytic | |
| OQ383619 | Salmonella phage MET_P1_122_58 | 58765 | 56.408 | Salmonella | Group I | Chivirus | Chivirus | Unclassified | Casjensviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Unspecified | High-quality | High-quality | 90.680 | AAI-based (high-confidence) | Chivirus | Chivirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | integrase orf_60 |