Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
KU963250Gordonia phage Vivi25933767.133GordoniaGroup I VividuovirusVividuovirusSchenleyvirinaeStackebrandtviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Gordonia terrae 3612High-qualityHigh-quality100.000AAI-based (high-confidence) VividuovirusVividuovirus vivi2Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KU963251Gordonia phage UmaThurman5012767.026GordoniaGroup I JujuvirusJujuvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Gordonia terrae 3612High-qualityHigh-quality98.800AAI-based (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancetemperateintegrase orf_35
KU963252Gordonia phage Schnabeltier4689567.037GordoniaGroup I SchnabeltiervirusSchnabeltiervirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Gordonia terrae 3612High-qualityHigh-quality99.960AAI-based (high-confidence) SchnabeltiervirusSchnabeltiervirus schnabeltierThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_35
KU963253Gordonia phage Phinally5926568.437GordoniaGroup I LeonardvirusLeonardvirusSchenleyvirinaeStackebrandtviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Gordonia terrae 3612High-qualityHigh-quality99.940AAI-based (high-confidence) LeonardvirusLeonardvirus leonardCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KU963254Gordonia phage Obliviate4928667.530GordoniaGroup I JujuvirusJujuvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Gordonia terrae 3612High-qualityHigh-quality97.310AAI-based (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancetemperateintegrase orf_36
KU963255Gordonia phage Nymphadora5343166.555GordoniaGroup I NymphadoravirusNymphadoravirusNymbaxtervirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Gordonia terrae 3612High-qualityHigh-quality100.000AAI-based (high-confidence) NymphadoravirusNymphadoravirus nymphadoraThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_35;immunity orf_40;cro orf_41
KU963256Gordonia phage Lucky104297965.378GordoniaGroup I LuckytenvirusLuckytenvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Gordonia terrae 3612High-qualityHigh-quality100.000AAI-based (high-confidence) LuckytenvirusLuckytenvirus lucky10The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_33;immunity orf_36
KU963257Gordonia phage Kita5034666.665GordoniaGroup I NymphadoravirusNymphadoravirusNymbaxtervirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Gordonia terrae 3612High-qualityHigh-quality95.960AAI-based (high-confidence) NymphadoravirusNymphadoravirus kitaThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_39;immunity orf_44;antirepressor orf_48
KU963258Gordonia phage Katyusha7538059.461GordoniaGroup I DemosthenesvirusDemosthenesvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Gordonia terrae 3612CompleteHigh-quality100.000DTR (high-confidence) DemosthenesvirusDemosthenesvirus katyushaCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KU963259Gordonia phage Guacamole4989467.186GordoniaGroup I JujuvirusJujuvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Gordonia terrae 3612High-qualityHigh-quality98.410AAI-based (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancetemperateintegrase orf_38
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