Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
KR054028Pseudomonas phage DL526586754.903PseudomonasGroup I PbunavirusPbunavirusUnclassifiedLindbergviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosa PAO1High-qualityHigh-quality99.720AAI-based (high-confidence) PbunavirusPbunavirus PB1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KR054029Pseudomonas phage DL544567352.394PseudomonasGroup I BruynoghevirusBruynoghevirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosa PAO1High-qualityHigh-quality100.000AAI-based (high-confidence) BruynoghevirusBruynoghevirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KR054030Pseudomonas phage DL606610354.917PseudomonasGroup I PbunavirusPbunavirusUnclassifiedLindbergviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosa PAO1High-qualityHigh-quality100.000AAI-based (high-confidence) PbunavirusPbunavirus DL60Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KR054031Pseudomonas phage DL624250862.195PseudomonasGroup I PhikmvvirusPhikmvvirusKrylovirinaeAutoscriptoviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosa PAO1High-qualityHigh-quality98.710AAI-based (high-confidence) PhikmvvirusPhikmvvirus DL62Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KR054032Pseudomonas phage DL647237854.953PseudomonasGroup I LitunavirusLitunavirusMigulavirinaeSchitoviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosa PAO1High-qualityHigh-quality99.380AAI-based (high-confidence) LitunavirusLitunavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KR054033Pseudomonas phage DL686611155.724PseudomonasGroup I PbunavirusPbunavirusUnclassifiedLindbergviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosa PAO1High-qualityHigh-quality100.000AAI-based (high-confidence) PbunavirusPbunavirus DL68Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KR060090Pseudoalteromonas phage Pq03339940.286PseudoalteromonasGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudoalteromonas sp. Bq0High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
KR063267Vibrio phage pre-CTX571447.252VibrioGroup II AffertcholeramvirusAffertcholeramvirusUnclassifiedInoviridaeTubulaviralesFaserviricetesHofneiviricotaLoebviraeFloreoviria Vibrio cholerae O1 biovar El Tor 15500Medium-qualityGenome-fragment77.640AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingsunknown
KR063268Vibrio phage pre-CTX508746.963VibrioGroup II AffertcholeramvirusAffertcholeramvirusUnclassifiedInoviridaeTubulaviralesFaserviricetesHofneiviricotaLoebviraeFloreoviria Vibrio cholerae str. 17449Medium-qualityGenome-fragment68.800AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingsunknown
KR063278Gordonia phage GMA77341956.611GordoniaGroup I GetseptimavirusGetseptimavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Gordonia malaquae CON60High-qualityHigh-quality98.640AAI-based (high-confidence) GetseptimavirusGetseptimavirus GMA7Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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