Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
KR052481Sinorhizobium phage phiM1918804749.027SinorhizobiumGroup I EmdodecavirusEmdodecavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Sinorhizobium melilotiHigh-qualityHigh-quality95.360AAI-based (high-confidence) EmdodecavirusEmdodecavirus M7Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperatecro orf_110
KR052482Sinorhizobium phage phiN320671349.075SinorhizobiumGroup I EmdodecavirusEmdodecavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Sinorhizobium melilotiHigh-qualityHigh-quality100.000AAI-based (high-confidence) EmdodecavirusEmdodecavirus N3Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperatecro orf_126
KR053194Gordonia phage GAL14997963.547GordoniaGroup I GalunavirusGalunavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Gordonia alkanivorans strain CON72High-qualityHigh-quality100.000AAI-based (high-confidence) GalunavirusGalunavirus GAL1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_31;cro orf_35;antirepressor orf_39
KR053195Gordonia phage GMA14120765.712GordoniaGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Gordonia malaquae strain BEN700High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_29
KR053196Tsukamurella phage TPA45621270.542TsukamurellaGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Tsukamurella paurometabola strain CON55High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_37
KR053197Gordonia phage GRU31772766.509GordoniaGroup I GrutrevirusGrutrevirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Gordonia rubropertincta strain CON38High-qualityHigh-quality100.000AAI-based (high-confidence) GrutrevirusGrutrevirus GRU3The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_17
KR053198Gordonia phage GMA51756266.353GordoniaGroup I GrutrevirusGrutrevirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Gordonia malaquae BEN700High-qualityHigh-quality99.640AAI-based (high-confidence) GrutrevirusGrutrevirus GMA5The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_18
KR053199Gordonia phage GMA44553766.368GordoniaGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Gordonia malaquae strain BEN700High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_31
KR053200Gordonia phage GTE65698267.797GordoniaGroup I DexdertvirusDexdertvirusSchenleyvirinaeStackebrandtviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Gordonia terrae strain CON34High-qualityHigh-quality100.000AAI-based (high-confidence) DexdertvirusDexdertvirus GTE6Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KR053201Gordonia phage GTE86761765.957GordoniaGroup I FoxborovirusFoxborovirusEmilbogenvirinaeZierdtviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Gordonia terrae strain G232High-qualityHigh-quality100.000AAI-based (high-confidence) FoxborovirusFoxborovirus GTE8Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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