Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
KR011062Tsukamurella phage TIN27696458.920TsukamurellaGroup I TinduovirusTinduovirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Tsukamurella inchonensis BEN701High-qualityHigh-quality100.000AAI-based (high-confidence) TinduovirusTinduovirus TIN2Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KR011063Tsukamurella phage TIN37626959.291TsukamurellaGroup I TinduovirusTinduovirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Tsukamurella inchonensis strain BEN701High-qualityHigh-quality99.600AAI-based (high-confidence) TinduovirusTinduovirus TIN3Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KR011064Tsukamurella phage TIN47626859.290TsukamurellaGroup I TinduovirusTinduovirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Tsukamurella inchonensis strain BEN701High-qualityHigh-quality99.600AAI-based (high-confidence) TinduovirusTinduovirus TIN3Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KR014248Escherichia phage vB_EcoM_AYO145A8737239.003EscherichiaGroup I FelixounavirusFelixounavirusOunavirinaeAndersonviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coli O145:NMHigh-qualityHigh-quality99.220AAI-based (high-confidence) FelixounavirusFelixounavirus AYO145ACurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KR029086Mycobacterium phage PDRPv6911066.351MycobacteriumGroup I PegunavirusPegunavirusBclasvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality99.470AAI-based (high-confidence) PegunavirusPegunavirus olineCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KR029087Mycobacterium phage PDRPxv6917166.347MycobacteriumGroup I PegunavirusPegunavirusBclasvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality99.560AAI-based (high-confidence) PegunavirusPegunavirus olineCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KR049063Enterococcus phage EFLK113095235.888EnterococcusGroup I KochikohdavirusKochikohdavirusBrockvirinaeHerelleviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Enterococcus faecalisHigh-qualityHigh-quality94.350AAI-based (high-confidence) KochikohdavirusKochikohdavirus EFLK1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KR052142Pseudomonas phage vB_PaeP_MAG47297954.820PseudomonasGroup I LitunavirusLitunavirusMigulavirinaeSchitoviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosa clinical isolate PA21CompleteHigh-quality100.000DTR (high-confidence) LitunavirusLitunavirus Mag4Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KR052143Pseudomonas phage vB_PaeM_MAG19455549.248PseudomonasGroup I PakpunavirusPakpunavirusSkurskavirinaeVandenendeviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosa clinical isolate PA31CompleteHigh-quality100.000DTR (high-confidence) PakpunavirusPakpunavirus MAG1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KR052480Sinorhizobium phage phiM718842749.037SinorhizobiumGroup I EmdodecavirusEmdodecavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Sinorhizobium melilotiHigh-qualityHigh-quality95.580AAI-based (high-confidence) EmdodecavirusEmdodecavirus M7Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperatecro orf_109
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