INPHARED2
INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| KC821622 | Cellulophaga phage phi46:3 | 72961 | 32.696 | Cellulophaga | Group I | Bacelvirus | Bacelvirus | Unclassified | Pachyviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Cellulophaga baltica NN016046 | High-quality | High-quality | 99.780 | AAI-based (high-confidence) | Bacelvirus | Bacelvirus phi46tres | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | integrase orf_31 |
| KC821624 | Cellulophaga phage phi14:2 | 100418 | 29.605 | Cellulophaga | Group I | Akihdevirus | Akihdevirus | Asinivirinae | Steigviridae | Crassvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Cellulophaga baltica #14 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Akihdevirus | Akihdevirus balticus | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| KC821625 | Cellulophaga phage phi13:1 | 76666 | 30.223 | Cellulophaga | Group I | Cbastvirus | Cbastvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Cellulophaga baltica #13 | Complete | High-quality | 100.000 | DTR (high-confidence) | Cbastvirus | Cbastvirus ST | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| KC821626 | Cellulophaga phage phi39:1 | 28760 | 31.332 | Cellulophaga | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Cellulophaga baltica NN015839 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| KC821627 | Cellulophaga phage phi18:2 | 38476 | 36.581 | Cellulophaga | Group I | Helsingorvirus | Helsingorvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Cellulophaga baltica #18 | High-quality | High-quality | 98.470 | AAI-based (high-confidence) | Helsingorvirus | Helsingorvirus Cba181 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| KC821629 | Cellulophaga phage phi38:2 | 54012 | 33.476 | Cellulophaga | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Cellulophaga baltica NN016038 | High-quality | High-quality | 98.980 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| KC821630 | Cellulophaga phage phi3:1 | 54427 | 33.448 | Cellulophaga | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Cellulophaga baltica MM#3 | High-quality | High-quality | 99.750 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| KC821632 | Cellulophaga phage phi4:1 | 145865 | 32.672 | Cellulophaga | Group I | Lightbulbvirus | Lightbulbvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Cellulophaga baltica #4 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Lightbulbvirus | Lightbulbvirus Cba41 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| KC821633 | Cellulophaga phage phi13:2 | 72369 | 32.873 | Cellulophaga | Group I | Baltivirus | Baltivirus | Unclassified | Pachyviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Cellulophaga baltica #13 | High-quality | High-quality | 98.940 | AAI-based (high-confidence) | Baltivirus | Baltivirus phi13duo | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | integrase orf_38 |
| KC821634 | Cellulophaga phage phi47:1 | 54016 | 33.472 | Cellulophaga | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Cellulophaga baltica NN014847 | High-quality | High-quality | 98.990 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic |