Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
KC847113Bacillus phage PBP1802820540.801BacillusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Bacillus pumilus strain CCTCC AB94180Medium-qualityGenome-fragment52.370AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
KC853746Burkholderia phage JG0684160460.689BurkholderiaGroup I MguuvirusMguuvirusUnclassifiedAutonotataviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Burkholderia cenocepacia K56-2CompleteHigh-quality100.000DTR (high-confidence) MguuvirusMguuvirus JG068Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KC862295Pseudomonas phage CHA_P18825554.628PseudomonasGroup I NankokuvirusNankokuvirusUnclassifiedVandenendeviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosa CHAHigh-qualityHigh-quality100.000AAI-based (high-confidence) NankokuvirusNankokuvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KC862296Pseudomonas phage P3_CHA8809754.827PseudomonasGroup I NankokuvirusNankokuvirusUnclassifiedVandenendeviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosa CHAHigh-qualityHigh-quality100.000AAI-based (high-confidence) NankokuvirusNankokuvirus PAKP3Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KC862297Pseudomonas phage PAK_P19319849.498PseudomonasGroup I PakpunavirusPakpunavirusSkurskavirinaeVandenendeviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosa PAKHigh-qualityHigh-quality100.000AAI-based (high-confidence) PakpunavirusPakpunavirus PAKP1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KC862298Pseudomonas phage PAK_P29249549.288PseudomonasGroup I PakpunavirusPakpunavirusSkurskavirinaeVandenendeviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosa PAKHigh-qualityHigh-quality99.460AAI-based (high-confidence) PakpunavirusPakpunavirus PAKP2Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperatecro orf_38
KC862299Pseudomonas phage PAK_P38809754.827PseudomonasGroup I NankokuvirusNankokuvirusUnclassifiedVandenendeviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosa PAKHigh-qualityHigh-quality100.000AAI-based (high-confidence) NankokuvirusNankokuvirus PAKP3Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KC862300Pseudomonas phage PAK_P49314749.267PseudomonasGroup I PakpunavirusPakpunavirusSkurskavirinaeVandenendeviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosa PAKHigh-qualityHigh-quality100.000AAI-based (high-confidence) PakpunavirusPakpunavirus PAKP4Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KC862301Pseudomonas phage PAK_P58813554.730PseudomonasGroup I NankokuvirusNankokuvirusUnclassifiedVandenendeviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosa PAKHigh-qualityHigh-quality100.000AAI-based (high-confidence) NankokuvirusNankokuvirus KPP10Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KC900378Pseudomonas phage LKA56474663.284PseudomonasGroup I HollowayvirusHollowayvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosa PAO1High-qualityHigh-quality100.000AAI-based (high-confidence) HollowayvirusHollowayvirus LKA5Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_69
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