Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
JX194238Pseudomonas phage PA267232154.818PseudomonasGroup I LitunavirusLitunavirusMigulavirinaeSchitoviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosaHigh-qualityHigh-quality99.300AAI-based (high-confidence) LitunavirusLitunavirus PA26Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
JX194239Staphylococcus phage SA1113632630.038StaphylococcusGroup I SilviavirusSilviavirusTwortvirinaeHerelleviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Staphylococcus aureusHigh-qualityHigh-quality100.000AAI-based (high-confidence) SilviavirusSilviavirus SA11Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateantirepressor orf_170
JX195166Pectobacterium phage My112202440.614PectobacteriumGroup I MyunavirusMyunavirusMccorquodalevirinaeDemerecviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedCompleteHigh-quality100.000DTR (high-confidence) MyunavirusMyunavirus My1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
JX202565Salmonella phage wksl34263349.797SalmonellaGroup I JerseyvirusJerseyvirusGuernseyvirinaeSarkviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedHigh-qualityHigh-quality99.420AAI-based (high-confidence) JerseyvirusJerseyvirus wksl3Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
JX233784Pseudomonas phage PA726674336.933PseudomonasGroup I PhikzvirusPhikzvirusUnclassifiedChimalliviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosaHigh-qualityHigh-quality95.150AAI-based (high-confidence) PhikzvirusPhikzvirus PA7Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
JX238501Bacillus phage phiAGATE14984440.966BacillusGroup I AgatevirusAgatevirusBastillevirinaeHerelleviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Bacillus pumilus GL1CompleteHigh-quality100.000DTR (high-confidence) AgatevirusAgatevirus agateCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
JX262215Propionibacterium phage P9.12921454.121PropionibacteriumGroup I PahexavirusPahexavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Cutibacterium acnesHigh-qualityHigh-quality99.160AAI-based (high-confidence) PahexavirusPahexavirus P91Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
JX262216Propionibacterium phage P142972954.082PropionibacteriumGroup I PahexavirusPahexavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Cutibacterium acnesHigh-qualityHigh-quality100.000AAI-based (high-confidence) PahexavirusPahexavirus P144Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
JX262217Propionibacterium phage P101A2957454.135PropionibacteriumGroup I PahexavirusPahexavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Cutibacterium acnesHigh-qualityHigh-quality100.000AAI-based (high-confidence) PahexavirusPahexavirus P101ACurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
JX262218Propionibacterium phage P104A2937153.982PropionibacteriumGroup I PahexavirusPahexavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Cutibacterium acnesHigh-qualityHigh-quality99.700AAI-based (high-confidence) PahexavirusPahexavirus P104ACurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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