Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
HQ634196Vibrio phage VBP327671842.483VibrioGroup I StoningtonvirusStoningtonvirusFuhrmanvirinaeSchitoviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Vibrio parahaemolyticus RIMD2210633CompleteHigh-quality100.000DTR (high-confidence) StoningtonvirusStoningtonvirus VBP47Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
HQ641340Vibrio phage ICP33916242.858VibrioGroup I ChatterjeevirusChatterjeevirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Vibrio choleraeHigh-qualityHigh-quality99.300AAI-based (high-confidence) ChatterjeevirusChatterjeevirus ICP3Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
HQ641341Vibrio phage ICP3_2009_B3904242.767VibrioGroup I ChatterjeevirusChatterjeevirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Vibrio choleraeHigh-qualityHigh-quality99.000AAI-based (high-confidence) ChatterjeevirusChatterjeevirus ICP3Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
HQ641342Vibrio phage ICP3_2009_A3898342.839VibrioGroup I ChatterjeevirusChatterjeevirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Vibrio choleraeHigh-qualityHigh-quality98.850AAI-based (high-confidence) ChatterjeevirusChatterjeevirus ICP3Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
HQ641343Vibrio phage ICP3_2008_A3934942.807VibrioGroup I ChatterjeevirusChatterjeevirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Vibrio choleraeHigh-qualityHigh-quality99.780AAI-based (high-confidence) ChatterjeevirusChatterjeevirus ICP3Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
HQ641344Vibrio phage ICP3_2007_A3908842.855VibrioGroup I ChatterjeevirusChatterjeevirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Vibrio choleraeHigh-qualityHigh-quality99.110AAI-based (high-confidence) ChatterjeevirusChatterjeevirus ICP3Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
HQ641345Vibrio phage ICP24967542.677VibrioGroup I IcepovirusIcepovirusUnclassifiedZobellviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Vibrio choleraeCompleteHigh-quality100.000DTR (high-confidence) IcepovirusIcepovirus bengalenseCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
HQ641346Vibrio phage ICP2_2006_A4862642.481VibrioGroup I IcepovirusIcepovirusUnclassifiedZobellviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Vibrio choleraeHigh-qualityHigh-quality96.520AAI-based (high-confidence) IcepovirusIcepovirus bengalenseCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
HQ641347Vibrio phage ICP112595637.073VibrioGroup I MohonavirusMohonavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Vibrio choleraeHigh-qualityHigh-quality94.220AAI-based (high-confidence) MohonavirusMohonavirus ICP1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateantirepressor orf_83
HQ641348Vibrio phage ICP1_2006_D12449737.092VibrioGroup I MohonavirusMohonavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Vibrio choleraeHigh-qualityHigh-quality93.130AAI-based (high-confidence) MohonavirusMohonavirus ICP1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateantirepressor orf_82
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