INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| HQ634196 | Vibrio phage VBP32 | 76718 | 42.483 | Vibrio | Group I | Stoningtonvirus | Stoningtonvirus | Fuhrmanvirinae | Schitoviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Vibrio parahaemolyticus RIMD2210633 | Complete | High-quality | 100.000 | DTR (high-confidence) | Stoningtonvirus | Stoningtonvirus VBP47 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| HQ641340 | Vibrio phage ICP3 | 39162 | 42.858 | Vibrio | Group I | Chatterjeevirus | Chatterjeevirus | Studiervirinae | Autotranscriptaviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Vibrio cholerae | High-quality | High-quality | 99.300 | AAI-based (high-confidence) | Chatterjeevirus | Chatterjeevirus ICP3 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| HQ641341 | Vibrio phage ICP3_2009_B | 39042 | 42.767 | Vibrio | Group I | Chatterjeevirus | Chatterjeevirus | Studiervirinae | Autotranscriptaviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Vibrio cholerae | High-quality | High-quality | 99.000 | AAI-based (high-confidence) | Chatterjeevirus | Chatterjeevirus ICP3 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| HQ641342 | Vibrio phage ICP3_2009_A | 38983 | 42.839 | Vibrio | Group I | Chatterjeevirus | Chatterjeevirus | Studiervirinae | Autotranscriptaviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Vibrio cholerae | High-quality | High-quality | 98.850 | AAI-based (high-confidence) | Chatterjeevirus | Chatterjeevirus ICP3 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| HQ641343 | Vibrio phage ICP3_2008_A | 39349 | 42.807 | Vibrio | Group I | Chatterjeevirus | Chatterjeevirus | Studiervirinae | Autotranscriptaviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Vibrio cholerae | High-quality | High-quality | 99.780 | AAI-based (high-confidence) | Chatterjeevirus | Chatterjeevirus ICP3 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| HQ641344 | Vibrio phage ICP3_2007_A | 39088 | 42.855 | Vibrio | Group I | Chatterjeevirus | Chatterjeevirus | Studiervirinae | Autotranscriptaviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Vibrio cholerae | High-quality | High-quality | 99.110 | AAI-based (high-confidence) | Chatterjeevirus | Chatterjeevirus ICP3 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| HQ641345 | Vibrio phage ICP2 | 49675 | 42.677 | Vibrio | Group I | Icepovirus | Icepovirus | Unclassified | Zobellviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Vibrio cholerae | Complete | High-quality | 100.000 | DTR (high-confidence) | Icepovirus | Icepovirus bengalense | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| HQ641346 | Vibrio phage ICP2_2006_A | 48626 | 42.481 | Vibrio | Group I | Icepovirus | Icepovirus | Unclassified | Zobellviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Vibrio cholerae | High-quality | High-quality | 96.520 | AAI-based (high-confidence) | Icepovirus | Icepovirus bengalense | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| HQ641347 | Vibrio phage ICP1 | 125956 | 37.073 | Vibrio | Group I | Mohonavirus | Mohonavirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Vibrio cholerae | High-quality | High-quality | 94.220 | AAI-based (high-confidence) | Mohonavirus | Mohonavirus ICP1 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | antirepressor orf_83 |
| HQ641348 | Vibrio phage ICP1_2006_D | 124497 | 37.092 | Vibrio | Group I | Mohonavirus | Mohonavirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Vibrio cholerae | High-quality | High-quality | 93.130 | AAI-based (high-confidence) | Mohonavirus | Mohonavirus ICP1 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | antirepressor orf_82 |