Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
HQ641349Vibrio phage ICP1_2006_C12449737.094VibrioGroup I MohonavirusMohonavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Vibrio choleraeHigh-qualityHigh-quality93.130AAI-based (high-confidence) MohonavirusMohonavirus ICP1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateantirepressor orf_82
HQ641350Vibrio phage ICP1_2006_B12309737.074VibrioGroup I MohonavirusMohonavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Vibrio choleraeHigh-qualityHigh-quality92.080AAI-based (high-confidence) MohonavirusMohonavirus ICP1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateantirepressor orf_81
HQ641351Vibrio phage ICP1_2006_A12310437.077VibrioGroup I MohonavirusMohonavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Vibrio choleraeHigh-qualityHigh-quality92.090AAI-based (high-confidence) MohonavirusMohonavirus ICP1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateantirepressor orf_81
HQ641352Vibrio phage ICP1_2005_A12937337.103VibrioGroup I MohonavirusMohonavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Vibrio choleraeHigh-qualityHigh-quality96.770AAI-based (high-confidence) MohonavirusMohonavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateantirepressor orf_86
HQ641353Vibrio phage ICP1_2001_A12482637.069VibrioGroup I MohonavirusMohonavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Vibrio choleraeHigh-qualityHigh-quality93.370AAI-based (high-confidence) MohonavirusMohonavirus ICP1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateantirepressor orf_83
HQ641354Vibrio phage ICP1_2004_A12808337.165VibrioGroup I MohonavirusMohonavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Vibrio choleraeHigh-qualityHigh-quality95.810AAI-based (high-confidence) MohonavirusMohonavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateantirepressor orf_86
HQ641380Enterobacter phage EcP15908036.875EnterobacterGroup I EceepunavirusEceepunavirusUnclassifiedSchitoviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Enterobacter cloacaeHigh-qualityHigh-quality100.000AAI-based (high-confidence) EceepunavirusEceepunavirus EcP1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
HQ665011Escherichia phage vB_EcoS_AKFV3310885338.945EscherichiaGroup I TequintavirusTequintavirusMarkadamsvirinaeDemerecviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coliHigh-qualityHigh-quality96.330AAI-based (high-confidence) TequintavirusTequintavirus AKFV33The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
HQ683709Planktothrix phage PaV-LD9529941.450PlanktothrixGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Planktothrix agardhii HAB637High-qualityHigh-quality98.500AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_18;antirepressor orf_94
HQ698895Synechococcus phage S-CBS46942050.828SynechococcusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Synechococcus sp. CB0101High-qualityHigh-quality99.170AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
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