Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

Clear
Choose fields for download

36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
HE815464Campylobacter phage CP2118283327.151CampylobacterGroup I FirehammervirusFirehammervirusUnclassifiedConnertonviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Campylobacter sp.High-qualityHigh-quality100.000AAI-based (high-confidence) FirehammervirusFirehammervirus CP21Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
HE858210Pseudotevenvirus RB4317983643.171UnspecifiedGroup I PseudotevenvirusPseudotevenvirusUnclassifiedStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedHigh-qualityHigh-quality100.000AAI-based (high-confidence) PseudotevenvirusPseudotevenvirus RB43Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
HE861935Streptococcus phage TP-J344560638.819StreptococcusGroup I BrussowvirusBrussowvirusUnclassifiedAliceevansviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus thermophilusHigh-qualityHigh-quality100.000AAI-based (high-confidence) BrussowvirusBrussowvirus TPJ34The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_1;cro orf_3;antirepressor orf_6
HE956704Lactobacillus phage phiAQ1133656636.520LactobacillusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedHigh-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateantirepressor orf_41
HE956707Yersinia phage phiR8-014208551.845YersiniaGroup I PienvirusPienvirusMelnykvirinaeAutonotataviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedCompleteHigh-quality100.000DTR (high-confidence) PienvirusPienvirus R801Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
HE956708Yersinia phage phiR2-0112269640.512YersiniaGroup I EpseptimavirusEpseptimavirusMarkadamsvirinaeDemerecviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Yersinia enterocoliticaCompleteHigh-quality100.000DTR (high-confidence) EpseptimavirusEpseptimavirus R201Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
HE956709Yersinia phage phiR1-RT16880934.544YersiniaGroup I TegunavirusTegunavirusTevenvirinaeStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Yersinia enterocoliticaHigh-qualityHigh-quality100.000AAI-based (high-confidence) TegunavirusTegunavirus r1rtCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
HE956710Yersinia phage phi80-184240647.637YersiniaGroup I PokrovskaiavirusPokrovskaiavirusMelnykvirinaeAutonotataviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedCompleteHigh-quality100.000DTR (high-confidence) PokrovskaiavirusPokrovskaiavirus pv8018Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
HE956711Yersinia phage phiD116706335.442YersiniaGroup I TequatrovirusTequatrovirusTevenvirinaeStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Yersinia pestisHigh-qualityHigh-quality99.360AAI-based (high-confidence) TequatrovirusTequatrovirus deeoneCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
HE962497Streptococcus phage SP-QS15830539.873StreptococcusGroup I SaphexavirusSaphexavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus pneumoniae D39High-qualityHigh-quality100.000AAI-based (high-confidence) SaphexavirusSaphexavirus SPQS1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
Previous Page 119 of 3635 Next