Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
FN594518Pseudomonas phage phi24314458.914PseudomonasGroup I TunggulvirusTunggulvirusUnclassifiedAutoscriptoviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas fluorescens SBW25High-qualityHigh-quality100.000AAI-based (high-confidence) TunggulvirusTunggulvirus f2Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateantirepressor orf_30
FN667788Campylobacter phage CP22017753427.359CampylobacterGroup I FirehammervirusFirehammervirusUnclassifiedConnertonviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Campylobacter sp.High-qualityHigh-quality99.390AAI-based (high-confidence) FirehammervirusFirehammervirus CP220Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
FN667789Campylobacter phage CPt1017572027.337CampylobacterGroup I FirehammervirusFirehammervirusUnclassifiedConnertonviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedHigh-qualityHigh-quality98.490AAI-based (high-confidence) FirehammervirusFirehammervirus CPt10Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
FN997652Streptococcus phage phi-SsUD.16374839.713StreptococcusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus suisHigh-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_59
FO818745Escherichia phage RCS4711515449.350EscherichiaGroup I PunavirusPunavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coliHigh-qualityHigh-quality100.000AAI-based (high-confidence) PunavirusPunavirus RCS47Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateantirepressor orf_52;parA orf_63;antirepressor orf_116;cro orf_117;cro orf_118
FQ312032Salmonella phage Vi0115706145.220SalmonellaGroup I KuttervirusKuttervirusCvivirinaeAckermannviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella enterica subsp. enterica serovar TyphiHigh-qualityHigh-quality99.390AAI-based (high-confidence) KuttervirusKuttervirus ViICurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
FQ482083Erwinia phage phiEa1048456543.830ErwiniaGroup I KolesnikvirusKolesnikvirusOunavirinaeAndersonviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedHigh-qualityHigh-quality99.670AAI-based (high-confidence) KolesnikvirusKolesnikvirus Ea214Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
FQ482084Erwinia phage phiEa1H4552249.681ErwiniaGroup I EracentumvirusEracentumvirusMolineuxvirinaeAutosignataviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedHigh-qualityHigh-quality99.540AAI-based (high-confidence) EracentumvirusEracentumvirus era103Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
FQ482085Erwinia phage phiEt884727947.330ErwiniaGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedHigh-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_32;cro orf_52
FQ482086Erwinia phage phiEa1004555449.677ErwiniaGroup I EracentumvirusEracentumvirusMolineuxvirinaeAutosignataviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedHigh-qualityHigh-quality99.610AAI-based (high-confidence) EracentumvirusEracentumvirus era103Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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