INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
MK284522	Mycobacterium phage Malec	53377	63.647	Mycobacterium	Group I	Turbidovirus	Turbidovirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Mycobacterium smegmatis str. MC2 155	High-quality	High-quality	100.000	AAI-based (high-confidence)	Turbidovirus	Turbidovirus malec	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_34;immunity orf_69
MK284526	Bacillus phage DK1	27180	30.868	Bacillus	Group I	Hemphillvirus	Hemphillvirus	Northropvirinae	Salasmaviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Bacillus cereus	High-quality	High-quality	100.000	AAI-based (high-confidence)	Hemphillvirus	Hemphillvirus DK1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	antirepressor orf_19
MK284527	Bacillus phage DK2	26357	30.914	Bacillus	Group I	Hemphillvirus	Hemphillvirus	Northropvirinae	Salasmaviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Bacillus cereus	High-quality	High-quality	100.000	AAI-based (high-confidence)	Hemphillvirus	Hemphillvirus DK2	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MK284528	Bacillus phage DK3	26865	31.055	Bacillus	Group I	Hemphillvirus	Hemphillvirus	Northropvirinae	Salasmaviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Bacillus cereus	High-quality	High-quality	100.000	AAI-based (high-confidence)	Hemphillvirus	Hemphillvirus DK3	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MK286578	Salmonella phage Season12	59047	56.467	Salmonella	Group I	Chivirus	Chivirus	Unclassified	Casjensviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Salmonella enterica subsp. enterica serovar Newport	High-quality	High-quality	91.040	AAI-based (high-confidence)	Chivirus	Chivirus FSLSP030	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_61
MK288021	Bacillus phage pW2	160627	32.536	Bacillus	Group I	Sophritavirus	Sophritavirus	Joanripponvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Bacillus cereus	High-quality	High-quality	97.480	AAI-based (high-confidence)	Sophritavirus	Sophritavirus pW2	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MK288022	Bacillus phage pW4	80919	34.024	Bacillus	Group I	Yihwangvirus	Yihwangvirus	Sejongvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Bacillus cereus	High-quality	High-quality	99.330	AAI-based (high-confidence)	Yihwangvirus	Yihwangvirus pW4	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_103
MK290737	Pectobacterium phage Arno162	91663	44.537	Pectobacterium	Group I	Arnovirus	Arnovirus	Unclassified	Andersonviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pectobacterium atrosepticum SCRI1043	High-quality	High-quality	99.870	AAI-based (high-confidence)	Arnovirus	Arnovirus arno162	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MK290738	Pectobacterium phage Arno18	91660	44.511	Pectobacterium	Group I	Arnovirus	Arnovirus	Unclassified	Andersonviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pectobacterium carotovorum subsp. carotovorum F18	High-quality	High-quality	99.870	AAI-based (high-confidence)	Arnovirus	Arnovirus arno18	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MK290739	Pectobacterium phage Q19	40227	49.651	Pectobacterium	Group I	Maklayavirus	Maklayavirus	Studiervirinae	Autotranscriptaviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pectobacterium carotovorum subsp. brasiliense F128	Complete	High-quality	100.000	DTR (high-confidence)	Maklayavirus	Maklayavirus Q19	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_4