Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MH937468Streptococcus phage CHPC8793601138.224StreptococcusGroup I MoineauvirusMoineauvirusUnclassifiedAliceevansviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus thermophilusHigh-qualityHigh-quality97.120AAI-based (high-confidence) MoineauvirusMoineauvirus CHPC879Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateantirepressor orf_27;cro orf_28
MH937469Streptococcus phage CHPC9193728138.269StreptococcusGroup I MoineauvirusMoineauvirusUnclassifiedAliceevansviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus thermophilusHigh-qualityHigh-quality100.000AAI-based (high-confidence) MoineauvirusMoineauvirus CHPC919The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperatecro orf_26
MH937470Streptococcus phage CHPC9253475938.479StreptococcusGroup I MoineauvirusMoineauvirusUnclassifiedAliceevansviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus thermophilusHigh-qualityHigh-quality93.840AAI-based (high-confidence) MoineauvirusMoineauvirus CHPC925Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateantirepressor orf_27
MH937471Streptococcus phage CHPC9273730338.975StreptococcusGroup I MoineauvirusMoineauvirusUnclassifiedAliceevansviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus thermophilusHigh-qualityHigh-quality100.000AAI-based (high-confidence) MoineauvirusMoineauvirus CHPC927Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateantirepressor orf_26;cro orf_27
MH937472Streptococcus phage CHPC9283402238.801StreptococcusGroup I MoineauvirusMoineauvirusUnclassifiedAliceevansviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus thermophilusHigh-qualityHigh-quality92.840AAI-based (high-confidence) MoineauvirusMoineauvirus CHPC928Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperatecro orf_23
MH937473Streptococcus phage CHPC9294087438.487StreptococcusGroup I BrussowvirusBrussowvirusUnclassifiedAliceevansviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus thermophilusHigh-qualityHigh-quality100.000AAI-based (high-confidence) BrussowvirusBrussowvirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperatecro orf_34
MH937474Streptococcus phage CHPC9303635038.586StreptococcusGroup I MoineauvirusMoineauvirusUnclassifiedAliceevansviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus thermophilusHigh-qualityHigh-quality98.020AAI-based (high-confidence) MoineauvirusMoineauvirus CHPC930Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateantirepressor orf_25
MH937475Streptococcus phage CHPC9313649039.200StreptococcusGroup I BrussowvirusBrussowvirusUnclassifiedAliceevansviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus thermophilusHigh-qualityHigh-quality95.320AAI-based (high-confidence) BrussowvirusBrussowvirus CHPC931The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperatecro orf_32
MH937476Streptococcus phage CHPC9333218240.128StreptococcusGroup I BrussowvirusBrussowvirusUnclassifiedAliceevansviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus thermophilusMedium-qualityGenome-fragment83.400AAI-based (high-confidence) BrussowvirusBrussowvirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
MH937477Streptococcus phage CHPC9503529939.015StreptococcusGroup I MoineauvirusMoineauvirusUnclassifiedAliceevansviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus thermophilusHigh-qualityHigh-quality95.170AAI-based (high-confidence) MoineauvirusMoineauvirus CHPC950Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateantirepressor orf_25;cro orf_26
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