INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

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Create interactive summaries of genome metadata and download the resulting figures.

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Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
MH892363	Streptococcus phage SW14	35913	39.866	Streptococcus	Group I	Brussowvirus	Brussowvirus	Unclassified	Aliceevansviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Streptococcus thermophilus	High-quality	High-quality	94.610	AAI-based (high-confidence)	Brussowvirus	Brussowvirus SW14	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	cro orf_30
MH892364	Streptococcus phage SW15	34289	39.386	Streptococcus	Group I	Brussowvirus	Brussowvirus	Unclassified	Aliceevansviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Streptococcus thermophilus	High-quality	High-quality	90.370	AAI-based (high-confidence)	Brussowvirus	Brussowvirus SW15	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	cro orf_29
MH892365	Streptococcus phage SW17	32005	36.844	Streptococcus	Group I	Piorkowskivirus	Piorkowskivirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Streptococcus thermophilus	High-quality	High-quality	98.250	AAI-based (high-confidence)	Piorkowskivirus	Piorkowskivirus SW16	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	antirepressor orf_27
MH892366	Streptococcus phage SW18	34825	39.434	Streptococcus	Group I	Brussowvirus	Brussowvirus	Unclassified	Aliceevansviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Streptococcus thermophilus	High-quality	High-quality	91.800	AAI-based (high-confidence)	Brussowvirus	Brussowvirus SW18	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	cro orf_32
MH892367	Streptococcus phage SW19	35153	38.096	Streptococcus	Group I	Vansinderenvirus	Vansinderenvirus	Unclassified	Aliceevansviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Streptococcus thermophilus	High-quality	High-quality	99.910	AAI-based (high-confidence)	Vansinderenvirus	Vansinderenvirus SW19	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	cro orf_26
MH892368	Streptococcus phage SW20	32567	36.810	Streptococcus	Group I	Piorkowskivirus	Piorkowskivirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Streptococcus thermophilus	High-quality	High-quality	99.990	AAI-based (high-confidence)	Piorkowskivirus	Piorkowskivirus SW16	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	antirepressor orf_27
MH892369	Streptococcus phage SW22	31738	37.350	Streptococcus	Group I	Piorkowskivirus	Piorkowskivirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Streptococcus thermophilus	High-quality	High-quality	97.530	AAI-based (high-confidence)	Piorkowskivirus	Piorkowskivirus SW22	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	antirepressor orf_27
MH892370	Streptococcus phage SW23	31422	37.031	Streptococcus	Group I	Piorkowskivirus	Piorkowskivirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Streptococcus thermophilus	High-quality	High-quality	96.530	AAI-based (high-confidence)	Piorkowskivirus	Piorkowskivirus SW16	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	antirepressor orf_27
MH892371	Streptococcus phage SW25	32013	37.197	Streptococcus	Group I	Piorkowskivirus	Piorkowskivirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Streptococcus thermophilus	High-quality	High-quality	98.390	AAI-based (high-confidence)	Piorkowskivirus	Piorkowskivirus SW22	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	antirepressor orf_28
MH892372	Streptococcus phage SW26	31283	36.985	Streptococcus	Group I	Piorkowskivirus	Piorkowskivirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Streptococcus thermophilus	High-quality	High-quality	96.100	AAI-based (high-confidence)	Piorkowskivirus	Piorkowskivirus SW16	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	antirepressor orf_25