Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MH746817Achromobacter phage vB_AdeS_ART4543655.890AchromobacterGroup I NyaakvirusNyaakvirusAlvaradovirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Achromobacter denitrificans PR1High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancelytic
MH751506Escherichia phage T216383235.317EscherichiaGroup I TequatrovirusTequatrovirusTevenvirinaeStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coli BHigh-qualityHigh-quality97.630AAI-based (high-confidence) TequatrovirusTequatrovirus T2Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MH752385Bacillus phage Ray174373344.552BacillusGroup I SplendidredvirusSplendidredvirusPolsinellivirinaeTrautnerviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Bacillus amyloliquefaciensHigh-qualityHigh-quality100.000AAI-based (high-confidence) SplendidredvirusSplendidredvirus ray17Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MH752840Escherichia phage vB_EcoM-Pr121LW13457543.582EscherichiaGroup I VequintavirusVequintavirusVequintavirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coli STEC O121High-qualityHigh-quality95.950AAI-based (high-confidence) VequintavirusVequintavirus LL12Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MH763831Acinetobacter phage vB_AbaP_B09_Aci084206739.285AcinetobacterGroup I FriunavirusFriunavirusBeijerinckvirinaeAutoscriptoviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Acinetobacter baumannii Paris B09CompleteHigh-quality100.000DTR (high-confidence) FriunavirusFriunavirus Aci08Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MH766655Curvibacter phage TJ13713658.151CurvibacterGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Curvibacter sp. AEP1.3High-qualityHigh-quality98.670AAI-based (medium-confidence) New_genusNew_speciesNo hits were found with the default settingstemperatecro orf_13
MH779499Gordonia phage Buggaboo6862665.627GordoniaGroup I KablunavirusKablunavirusEmilbogenvirinaeZierdtviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Gordonia terrae 3612High-qualityHigh-quality100.000AAI-based (high-confidence) KablunavirusKablunavirus buggabooCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MH779501Gordonia phage Emianna6819065.801GordoniaGroup I FoxborovirusFoxborovirusEmilbogenvirinaeZierdtviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Gordonia terrae 3612High-qualityHigh-quality100.000AAI-based (high-confidence) FoxborovirusFoxborovirus emiannaCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MH779503Mycobacterium phage Gemini7564962.920MycobacteriumGroup I KostyavirusKostyavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality99.380AAI-based (high-confidence) KostyavirusKostyavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_54;immunity orf_57
MH779505Mycobacterium phage Grizzly4175266.758MycobacteriumGroup I LiefievirusLiefievirusGclasvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality96.120AAI-based (high-confidence) LiefievirusLiefievirus grizzlyCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_32
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