Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MH051917Enterobacteria phage vB_EcoM_IME34117237939.515EnterobacteriaGroup I DhakavirusDhakavirusTevenvirinaeStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coli BL21(DE3)High-qualityHigh-quality100.000AAI-based (high-confidence) DhakavirusDhakavirus ime348Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MH051918Escherichia phage vB_EcoS_IME3475004849.706EscherichiaGroup I BadaguanvirusBadaguanvirusTunavirinaeDrexlerviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coli BL21(DE3)High-qualityHigh-quality99.980AAI-based (high-confidence) BadaguanvirusBadaguanvirus IME347Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MH059632Dickeya phage Dagda4048448.113DickeyaGroup I AarhusvirusAarhusvirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Dickeya solaniHigh-qualityHigh-quality99.760AAI-based (high-confidence) AarhusvirusAarhusvirus dagdaCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MH059633Xanthomonas phage Carpasina6193952.356XanthomonasGroup I CarpasinavirusCarpasinavirusUnclassifiedLindbergviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Xanthomonas campestrisHigh-qualityHigh-quality100.000AAI-based (high-confidence) CarpasinavirusCarpasinavirus carpasinaCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MH059634Dickeya phage Sucellus3982641.902DickeyaGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Dickeya dadantiiHigh-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
MH059635Dickeya phage Amaethon4143639.791DickeyaGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Dickeya dadantiiHigh-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
MH059636Erwinia phage Cronus17577438.378ErwiniaGroup I RisoevirusRisoevirusTevenvirinaeStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Erwinia amylovora DSM17948High-qualityHigh-quality99.980AAI-based (high-confidence) RisoevirusRisoevirus cronusCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_78
MH059637Pectobacterium phage Jarilo4055250.094PectobacteriumGroup I JarilovirusJarilovirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pectobacterium carotovorum subsp. carotovorum DSM30170High-qualityHigh-quality100.000AAI-based (high-confidence) JarilovirusJarilovirus jariloCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MH059638Pectobacterium phage Nepra7450948.701PectobacteriumGroup I CbunavirusCbunavirusWaldeevirinaeSchitoviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pectobacterium atrosepticum DSM18077High-qualityHigh-quality97.860AAI-based (high-confidence) CbunavirusCbunavirus nepraCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MH059639Dickeya phage Ninurta3969950.986DickeyaGroup I NingirsuvirusNingirsuvirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Dickeya solani DSM 28711High-qualityHigh-quality100.000AAI-based (high-confidence) NingirsuvirusNingirsuvirus ninurtaCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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