Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MH051254Mycobacterium phage Jabiru5053059.986MycobacteriumGroup I BenedictvirusBenedictvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality99.980AAI-based (high-confidence) BenedictvirusBenedictvirus benedictCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_28;immunity orf_66
MH051255Mycobacterium phage Leston6180864.950MycobacteriumGroup I KratiovirusKratiovirusWeiservirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality99.310AAI-based (high-confidence) KratiovirusKratiovirus lestonThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_35;immunity orf_37;cro orf_38
MH051256Mycobacterium phage Midas25121560.980MycobacteriumGroup I BenedictvirusBenedictvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality100.000AAI-based (high-confidence) BenedictvirusBenedictvirus cucoThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_27;immunity orf_62
MH051257Mycobacterium phage OwlsT2W5651561.219MycobacteriumGroup I CheoctovirusCheoctovirusGracegardnervirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality98.190AAI-based (high-confidence) CheoctovirusCheoctovirus owlsT2WThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_41;immunity orf_43;antirepressor orf_45
MH051258Mycobacterium phage SamScheppers5835167.627MycobacteriumGroup I FionnbharthvirusFionnbharthvirusWeiservirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality100.000AAI-based (high-confidence) FionnbharthvirusFionnbharthvirus taquitoCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_44;immunity orf_46;cro orf_47;immunity orf_82
MH051259Mycobacterium phage TNguyen75041363.805MycobacteriumGroup I VeracruzvirusVeracruzvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality100.000AAI-based (high-confidence) VeracruzvirusVeracruzvirus pistachioCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_31;immunity orf_68
MH051260Mycobacterium phage InterFolia15622164.697MycobacteriumGroup I BixzunavirusBixzunavirusCeeclamvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality97.930AAI-based (high-confidence) BixzunavirusBixzunavirus astraeaCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MH051261Mycobacterium phage Tyke15667964.651MycobacteriumGroup I BixzunavirusBixzunavirusCeeclamvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality98.210AAI-based (high-confidence) BixzunavirusBixzunavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MH051264Mycobacterium phage Cobra6887566.412MycobacteriumGroup I PegunavirusPegunavirusBclasvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality99.130AAI-based (high-confidence) PegunavirusPegunavirus olineCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MH051265Mycobacterium phage Yahalom6848267.438MycobacteriumGroup I PipefishvirusPipefishvirusBclasvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality98.110AAI-based (high-confidence) PipefishvirusPipefishvirus athenaCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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