INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

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Create interactive summaries of genome metadata and download the resulting figures.

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
MG972768	Klebsiella phage myPSH1235	45135	53.663	Klebsiella	Group I	Drulisvirus	Drulisvirus	Slopekvirinae	Autoscriptoviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Klebsiella pneumoniae	High-quality	High-quality	100.000	AAI-based (high-confidence)	Drulisvirus	Drulisvirus myPSH1235	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MG973030	Erwinia phage vB_EamM-Bue1	164037	50.204	Erwinia	Group I	Nezavisimistyvirus	Nezavisimistyvirus	Unclassified	Ackermannviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Erwinia amylovora CFBP 1430	High-quality	High-quality	100.000	AAI-based (high-confidence)	Nezavisimistyvirus	Nezavisimistyvirus bue1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MG976803	Escherichia phage myPSH2311	68712	42.367	Escherichia	Group I	Kuravirus	Kuravirus	Gordonclarkvirinae	Mtkvariviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli	High-quality	High-quality	90.320	AAI-based (high-confidence)	Kuravirus	Kuravirus myPSH2311	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MG983742	Bacillus phage Anath	52369	41.139	Bacillus	Group I	Anathvirus	Anathvirus	Unclassified	Ehrlichviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Bacillus mycoides	High-quality	High-quality	100.000	AAI-based (high-confidence)	Anathvirus	Anathvirus anath	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	antirepressor orf_5
MG983743	Xanthomonas phage RiverRider	76335	49.393	Xanthomonas	Group I	Riverridervirus	Riverridervirus	Gebvirinae	Schitoviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Xanthomonas fragariae	Complete	High-quality	100.000	DTR (high-confidence)	Riverridervirus	Riverridervirus riverrider	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MG983840	Escherichia phage myPSH1131	76163	42.253	Escherichia	Group I	Kuravirus	Kuravirus	Gordonclarkvirinae	Mtkvariviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli	High-quality	High-quality	100.000	AAI-based (high-confidence)	Kuravirus	Kuravirus myPSH1131	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MG986485	Escherichia phage SH2026Stx1	61564	49.391	Escherichia	Group I	Traversvirus	Traversvirus	Sepvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli O157:H7 SH2026	High-quality	High-quality	93.800	AAI-based (high-confidence)	Traversvirus	Traversvirus SH2026Stx1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_1;antirepressor orf_50
MG999954	Enterobacter phage myPSH1140	172614	39.883	Enterobacter	Group I	Karamvirus	Karamvirus	Tevenvirinae	Straboviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Enterobacter cloacae	High-quality	High-quality	100.000	AAI-based (high-confidence)	Karamvirus	Karamvirus mypsh1140	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MH000602	Streptococcus phage D5842	36501	39.125	Streptococcus	Group I	Moineauvirus	Moineauvirus	Unclassified	Aliceevansviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Streptococcus sp.	High-quality	High-quality	98.400	AAI-based (high-confidence)	Moineauvirus	Moineauvirus mv128	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	cro orf_24
MH000603	Streptococcus phage D1024	37757	38.144	Streptococcus	Group I	Moineauvirus	Moineauvirus	Unclassified	Aliceevansviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Streptococcus thermophilus DGCC7854	High-quality	High-quality	100.000	AAI-based (high-confidence)	Moineauvirus	Moineauvirus D1024	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	cro orf_29;cro orf_31