INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
MG962375	Mycobacterium phage ProfessorX	68086	66.545	Mycobacterium	Group I	Pegunavirus	Pegunavirus	Bclasvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Mycobacterium smegmatis str. MC2 155	High-quality	High-quality	98.000	AAI-based (high-confidence)	Pegunavirus	Pegunavirus Pg1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MG962376	Mycobacterium phage Thumb	68408	57.502	Mycobacterium	Group I	Konstantinevirus	Konstantinevirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Mycobacterium smegmatis str. MC2 155	High-quality	High-quality	98.450	AAI-based (high-confidence)	Konstantinevirus	Konstantinevirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MG963916	Escherichia phage PDX	138427	43.548	Escherichia	Group I	Vequintavirus	Vequintavirus	Vequintavirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli	Complete	High-quality	100.000	DTR (high-confidence)	Vequintavirus	Vequintavirus PDX	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MG966531	Escherichia phage Ebrios	39752	52.853	Escherichia	Group I	Ebriosvirus	Ebriosvirus	Studiervirinae	Autotranscriptaviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli C	High-quality	High-quality	99.500	AAI-based (high-confidence)	Ebriosvirus	Ebriosvirus ebrios	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MG966533	Pseudoalteromonas phage Cr39582	10584	41.903	Pseudoalteromonas	Unclassified	Merivirus	Merivirus	Unclassified	Corticoviridae	Vinavirales	Belvinaviricetes	Produgelaviricota	Abadenavirae	Varidnaviria	Pseudoalteromonas sp. 6751	High-quality	High-quality	100.000	AAI-based (high-confidence)	Merivirus	Merivirus Cr39582	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MG967616	Bacillus phage v_B-Bak1	80764	33.928	Bacillus	Group I	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Bacillus anthracis ST-1	High-quality	High-quality	98.880	AAI-based (high-confidence)	Basiliskvirus	Basiliskvirus basilisk	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_98
MG967617	Bacillus phage v_B-Bak6	80764	33.927	Bacillus	Group I	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Bacillus anthracis ST-1	High-quality	High-quality	98.880	AAI-based (high-confidence)	Basiliskvirus	Basiliskvirus basilisk	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_98
MG967618	Bacillus phage v_B-Bak10	82931	33.810	Bacillus	Group I	Basiliskvirus	Basiliskvirus	Sejongvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Bacillus anthracis ST-1	High-quality	High-quality	100.000	AAI-based (high-confidence)	Basiliskvirus	Basiliskvirus bak10	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_100
MG969404	Salmonella phage GE_vB_7A	85780	38.957	Salmonella	Group I	Felixounavirus	Felixounavirus	Ounavirinae	Andersonviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Salmonella enterica subsp. enterica	High-quality	High-quality	97.410	AAI-based (high-confidence)	Felixounavirus	Felixounavirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MG969405	Salmonella phage GE_vB_B1	59703	38.911	Salmonella	Group I	Ounavirinae	Unclassified	Ounavirinae	Andersonviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Salmonella enterica subsp. enterica	Medium-quality	Genome-fragment	67.600	AAI-based (high-confidence)	Felixounavirus	Felixounavirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic