Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MG727698Paenibacillus phage PBL1c4061141.247PaenibacillusGroup I FernvirusFernvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Paenibacillus larvaeHigh-qualityHigh-quality100.000AAI-based (high-confidence) FernvirusFernvirus PBL1cCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateantirepressor orf_30;antirepressor orf_34;antirepressor orf_38;integrase orf_63
MG727699Paenibacillus phage Pagassa4003542.001PaenibacillusGroup I FernvirusFernvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Paenibacillus larvaeHigh-qualityHigh-quality99.890AAI-based (high-confidence) FernvirusFernvirus pagassaCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_28;antirepressor orf_35;antirepressor orf_40
MG727700Paenibacillus phage Tadhana3788042.112PaenibacillusGroup I FernvirusFernvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Paenibacillus larvaeHigh-qualityHigh-quality94.510AAI-based (high-confidence) FernvirusFernvirus tadhanaCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_28;antirepressor orf_33;antirepressor orf_37
MG727701Paenibacillus phage Leyra4227641.395PaenibacillusGroup I FernvirusFernvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Paenibacillus larvaeHigh-qualityHigh-quality100.000AAI-based (high-confidence) FernvirusFernvirus leyraCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateantirepressor orf_29;integrase orf_30;antirepressor orf_33;antirepressor orf_35;antirepressor orf_39;integrase orf_58
MG727702Paenibacillus phage Likha3977841.302PaenibacillusGroup I FernvirusFernvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Paenibacillus larvaeHigh-qualityHigh-quality99.290AAI-based (high-confidence) FernvirusFernvirus likhaCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_27;antirepressor orf_31;antirepressor orf_35;integrase orf_54
MG732930Enterobacter phage Ec_L15189448.241EnterobacterGroup I EclunavirusEclunavirusUnclassifiedDrexlerviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Enterobacter cloacaeHigh-qualityHigh-quality99.490AAI-based (high-confidence) EclunavirusEclunavirus EcL1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MG736918Erwinia phage vB_EamP-S24549549.792ErwiniaGroup I EracentumvirusEracentumvirusMolineuxvirinaeAutosignataviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Erwinia amylovora CFBP 1430CompleteHigh-quality100.000DTR (high-confidence) EracentumvirusEracentumvirus S2Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MG744354Lactobacillus phage Satyr8107639.417LactobacillusGroup I MaenadvirusMaenadvirusTybeckvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Lactobacillus plantarumHigh-qualityHigh-quality100.000AAI-based (high-confidence) MaenadvirusMaenadvirus satyrCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_83;antirepressor orf_117
MG746602Klebsiella phage vB_Kpn_F4817076440.783KlebsiellaGroup I MarfavirusMarfavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniae ST101High-qualityHigh-quality100.000AAI-based (high-confidence) MarfavirusMarfavirus F48Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MG747435Ralstonia phage RsoM1USA3930965.153RalstoniaGroup I AresaunavirusAresaunavirusUnclassifiedPeduoviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Ralstonia solanacearumHigh-qualityHigh-quality100.000AAI-based (high-confidence) AresaunavirusAresaunavirus RsoM1USACurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_53
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