Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MG253647Lactococcus phage vB_Llc_bIBB5g13013234.667LactococcusGroup I SkunavirusSkunavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Lactococcus lactis IL1403High-qualityHigh-quality99.260AAI-based (high-confidence) SkunavirusSkunavirus bIBB5g1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MG253648Lactococcus phage vB_Llc_bIBB14s3024934.679LactococcusGroup I SkunavirusSkunavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Lactococcus lactis IL1403High-qualityHigh-quality99.650AAI-based (high-confidence) SkunavirusSkunavirus bIBB5g1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MG253649Lactococcus phage vB_Llc_bIBB24tp12973634.712LactococcusGroup I SkunavirusSkunavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Lactococcus lactis IL1403High-qualityHigh-quality97.970AAI-based (high-confidence) SkunavirusSkunavirus bIBB5g1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MG253650Lactococcus phage vB_Llc_bIBB77s2942334.864LactococcusGroup I SkunavirusSkunavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Lactococcus lactis IL1403High-qualityHigh-quality96.930AAI-based (high-confidence) SkunavirusSkunavirus bibb29Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MG253651Lactococcus phage vB_Llc_bIBBEg12965934.684LactococcusGroup I SkunavirusSkunavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Lactococcus lactis IL1403High-qualityHigh-quality97.720AAI-based (high-confidence) SkunavirusSkunavirus bIBB5g1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MG253652Lactococcus phage vB_Llc_bIBBF122945434.824LactococcusGroup I SkunavirusSkunavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Lactococcus lactis IL1403High-qualityHigh-quality97.030AAI-based (high-confidence) SkunavirusSkunavirus bIBBF12Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MG253653Lactococcus phage vB_Llc_bIBBF132937434.806LactococcusGroup I SkunavirusSkunavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Lactococcus lactis IL1403High-qualityHigh-quality96.760AAI-based (high-confidence) SkunavirusSkunavirus bIBBF12Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MG264739Enterococcus phage phiNASRA14013934.742EnterococcusGroup I EfquatrovirusEfquatrovirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Enterococcus faecalis ATCC 49533High-qualityHigh-quality98.530AAI-based (high-confidence) EfquatrovirusEfquatrovirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MG266157Dickeya phage PP3515204849.304DickeyaGroup I LimestonevirusLimestonevirusAglimvirinaeAckermannviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Dickeya solani F012High-qualityHigh-quality96.290AAI-based (high-confidence) LimestonevirusLimestonevirus limestoneThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
MG269973TM7 phage DolZOral124_53_653884052.490UnspecifiedGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria candidate division TM7 DolZOral124_TM7_55_12High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
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