Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
KY888882Bacillus phage Flapjack16613737.599BacillusGroup I BequatrovirusBequatrovirusBastillevirinaeHerelleviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Bacillus thuringiensis subsp. kurstaki ATCC 33679CompleteHigh-quality100.000DTR (high-confidence) BequatrovirusBequatrovirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KY888885Mastigocladus phage CHP584074043.883MastigocladusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mastigocladus sp.High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
KY914478Escherichia phage ArgO1456202050.002EscherichiaGroup I OslovirusOslovirusSepvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coli O145:H- strain FB5CompleteHigh-quality100.000DTR (high-confidence) OslovirusOslovirus ArgO145The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_1;antirepressor orf_7;antirepressor orf_30;cro orf_33;cro orf_34;antirepressor orf_50
KY914485Aeromonas phage phiA8-2914497448.180AeromonasGroup I TedavirusTedavirusUnclassifiedAckermannviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Aeromonas sp.High-qualityHigh-quality100.000AAI-based (high-confidence) TedavirusTedavirus A829Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_59
KY921761Bacillus phage BeachBum2105435.409BacillusGroup I HarambevirusHarambevirusUnclassifiedSalasmaviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Bacillus thuringiensis subsp. kurstaki ATCC 33679High-qualityHigh-quality97.090AAI-based (high-confidence) HarambevirusHarambevirus beachbumCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KY926698Lactococcus phage PLgY-162934237.373LactococcusGroup I UwajimavirusUwajimavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Lactococcus garvieaeHigh-qualityHigh-quality94.450AAI-based (high-confidence) UwajimavirusUwajimavirus PLgW1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KY926699Lactococcus phage PLgY-302928437.410LactococcusGroup I UwajimavirusUwajimavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Lactococcus garvieaeHigh-qualityHigh-quality94.260AAI-based (high-confidence) UwajimavirusUwajimavirus PLgW1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KY926792Propionibacterium phage PacnesP12953354.011PropionibacteriumGroup I PahexavirusPahexavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Propionibacterium acnes ATCC 11828High-qualityHigh-quality100.000AAI-based (high-confidence) PahexavirusPahexavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KY926793Propionibacterium phage PacnesP23001654.404PropionibacteriumGroup I PahexavirusPahexavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Propionibacterium acnes ATCC 11828High-qualityHigh-quality100.000AAI-based (high-confidence) PahexavirusPahexavirus pacnes201215Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KY939598Alteromonadaceae phage B233513259.507UnspecifiedGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria AlteromonadaceaeHigh-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
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