Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
KY624616Corynebacterium phage LGCM-V93667151.049CorynebacteriumGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Corynebacterium pseudotuberculosis biovar Equi 48High-qualityHigh-quality99.990AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_3;antirepressor orf_16
KY626162Salmonella phage Si38441939.013SalmonellaGroup I FelixounavirusFelixounavirusOunavirinaeAndersonviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella enterica subsp. enterica serovar InfantisHigh-qualityHigh-quality95.890AAI-based (high-confidence) FelixounavirusFelixounavirus Si3Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KY626163Salmonella phage SE402891450.173SalmonellaGroup I GuernseyvirinaeUnclassifiedGuernseyvirinaeSarkviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella enterica subsp. enterica serovar EnteritidisMedium-qualityGenome-fragment67.520AAI-based (high-confidence) JerseyvirusJerseyvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KY626176Marinomonas phage CPP1m4424543.363MarinomonasGroup I MurciavirusMurciavirusColwellvirinaeAutosignataviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Marinomonas mediterraneaHigh-qualityHigh-quality97.490AAI-based (high-confidence) MurciavirusMurciavirus CPP1mCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KY626177Marinomonas phage CPG1g4424443.360MarinomonasGroup I MurciavirusMurciavirusColwellvirinaeAutosignataviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Marinomonas mediterraneaHigh-qualityHigh-quality97.490AAI-based (high-confidence) MurciavirusMurciavirus CPP1mCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KY629563Sphingobium phage Lacusarx13013860.175SphingobiumGroup I LacusarxvirusLacusarxvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Sphingobium sp. IP1High-qualityHigh-quality100.000AAI-based (high-confidence) LacusarxvirusLacusarxvirus lacusarxCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_80;integrase orf_103
KY629621Streptococcus virus MS15607542.261StreptococcusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus pneumoniae R6High-qualityHigh-quality96.630AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
KY630163Salmonella phage S815843244.527SalmonellaGroup I KuttervirusKuttervirusCvivirinaeAckermannviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella gallinarumHigh-qualityHigh-quality100.000AAI-based (high-confidence) KuttervirusKuttervirus BSP101Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KY630187Serratia phage BF35715434.423SerratiaGroup I EneladusvirusEneladusvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Serratia marcescens UCC2017High-qualityHigh-quality98.910AAI-based (high-confidence) EneladusvirusEneladusvirus BFThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
KY652723Klebsiella phage vB_KpnP_PRA334060552.516KlebsiellaGroup I PrzondovirusPrzondovirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniaeHigh-qualityHigh-quality100.000AAI-based (high-confidence) PrzondovirusPrzondovirus PRA33Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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