Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
KY065476Streptococcus phage IPP364078140.190StreptococcusGroup I SpinunavirusSpinunavirusFerrettivirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus pneumoniae 22F/2High-qualityHigh-quality97.400AAI-based (high-confidence) SpinunavirusSpinunavirus IPP36Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_1
KY065477Streptococcus phage IPP373922140.139StreptococcusGroup I SpinunavirusSpinunavirusFerrettivirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus pneumoniae USA22High-qualityHigh-quality93.690AAI-based (high-confidence) SpinunavirusSpinunavirus IPP37Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_1;cro orf_5
KY065478Streptococcus phage IPP384040339.972StreptococcusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus pneumoniae GA47373High-qualityHigh-quality95.950AAI-based (high-confidence) SpinunavirusSpinunavirus Spn1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_1;cro orf_3
KY065479Streptococcus phage IPP393776138.362StreptococcusGroup I PaclarkvirusPaclarkvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus pneumoniae 19AHigh-qualityHigh-quality97.600AAI-based (high-confidence) PaclarkvirusPaclarkvirus IPP39Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_1;antirepressor orf_5
KY065480Streptococcus phage IPP404044940.041StreptococcusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus pneumoniae Ala243High-qualityHigh-quality95.600AAI-based (high-confidence) SpinunavirusSpinunavirus Spn1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_1;cro orf_3;cro orf_8
KY065481Streptococcus phage IPP413491539.562StreptococcusGroup I AdrianbuildvirusAdrianbuildvirusMcshanvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus pneumoniae 23F/10High-qualityHigh-quality100.000AAI-based (high-confidence) AdrianbuildvirusAdrianbuildvirus IPP41The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_1;cro orf_4;antirepressor orf_9;integrase orf_26
KY065482Streptococcus phage IPP423506139.331StreptococcusGroup I AdrianbuildvirusAdrianbuildvirusMcshanvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus pneumoniae AP200High-qualityHigh-quality100.000AAI-based (high-confidence) AdrianbuildvirusAdrianbuildvirus IPP42The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_1;antirepressor orf_7;antirepressor orf_19;cro orf_20;integrase orf_22
KY065483Streptococcus phage IPP433303239.132StreptococcusGroup I AdrianbuildvirusAdrianbuildvirusMcshanvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus pneumoniae 44/3High-qualityHigh-quality99.070AAI-based (high-confidence) AdrianbuildvirusAdrianbuildvirus IPP43The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_1;cro orf_6;antirepressor orf_11;cro orf_25;integrase orf_27
KY065484Streptococcus phage IPP443057238.853StreptococcusGroup I AdrianbuildvirusAdrianbuildvirusMcshanvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus pneumoniae USA11High-qualityHigh-quality92.670AAI-based (high-confidence) AdrianbuildvirusAdrianbuildvirus IPP44The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_1;cro orf_4;antirepressor orf_12;integrase orf_26
KY065485Streptococcus phage IPP453738740.439StreptococcusGroup I MalkevirusMalkevirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus pneumoniae 670High-qualityHigh-quality100.000AAI-based (high-confidence) MalkevirusMalkevirus IPP45The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_1;antirepressor orf_5;integrase orf_32
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