INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

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Create interactive summaries of genome metadata and download the resulting figures.

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle
KR337652	Propionibacterium phage Stormborn	29330	53.802	Propionibacterium	Group I	Pahexavirus	Pahexavirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Propionibacterium acnes ATCC 6919	High-quality	High-quality	99.560	AAI-based (high-confidence)	Pahexavirus	Pahexavirus stormborn	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
KR337653	Propionibacterium phage Pirate	29324	54.085	Propionibacterium	Group I	Pahexavirus	Pahexavirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Propionibacterium acnes ATCC 6919	High-quality	High-quality	99.540	AAI-based (high-confidence)	Pahexavirus	Pahexavirus pirate	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
KR337654	Propionibacterium phage Ouroboros	29506	53.928	Propionibacterium	Group I	Pahexavirus	Pahexavirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Propionibacterium acnes ATCC 6919	High-quality	High-quality	100.000	AAI-based (high-confidence)	Pahexavirus	Pahexavirus ouroboros	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
KR347352	Propionibacterium phage BruceLethal	29249	54.039	Propionibacterium	Group I	Pahexavirus	Pahexavirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Propionibacterium acnes ATCC 6919	High-quality	High-quality	99.290	AAI-based (high-confidence)	Pahexavirus	Pahexavirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
KR347353	Propionibacterium phage Enoki	29347	54.588	Propionibacterium	Group I	Pahexavirus	Pahexavirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Propionibacterium acnes ATCC 6919	High-quality	High-quality	99.620	AAI-based (high-confidence)	Pahexavirus	Pahexavirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
KR347354	Propionibacterium phage Moyashi	29254	54.587	Propionibacterium	Group I	Pahexavirus	Pahexavirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Propionibacterium acnes ATCC 6919	High-quality	High-quality	99.310	AAI-based (high-confidence)	Pahexavirus	Pahexavirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
KR347355	Propionibacterium phage QueenBey	29338	54.145	Propionibacterium	Group I	Pahexavirus	Pahexavirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Propionibacterium acnes ATCC 6919	High-quality	High-quality	99.590	AAI-based (high-confidence)	Pahexavirus	Pahexavirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
KR422352	Escherichia phage APCEc01	168771	37.707	Escherichia	Group I	Mosigvirus	Mosigvirus	Tevenvirinae	Straboviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli	High-quality	High-quality	99.520	AAI-based (high-confidence)	Mosigvirus	Mosigvirus mar005p1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
KR422353	Escherichia phage phiAPCEc03	103737	38.933	Escherichia	Group I	Tequintavirus	Tequintavirus	Markadamsvirinae	Demerecviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli	High-quality	High-quality	91.820	AAI-based (high-confidence)	Tequintavirus	Tequintavirus APCEc03	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
KR534323	Pseudoalteromonas phage H101	131903	37.364	Pseudoalteromonas	Group I	Shandongvirus	Shandongvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pseudoalteromonas marina	Complete	High-quality	100.000	DTR (high-confidence)	Shandongvirus	Shandongvirus H101	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic