INPHARED2
INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| KR093653 | Moraxella phage Mcat29 | 34549 | 42.230 | Moraxella | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Moraxella catarrhalis | Medium-quality | Genome-fragment | 75.200 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| KR093654 | Moraxella phage Mcat30 | 30974 | 42.678 | Moraxella | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Moraxella catarrhalis | Medium-quality | Genome-fragment | 67.450 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| KR093655 | Moraxella phage Mcat31 | 30974 | 42.678 | Moraxella | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Moraxella catarrhalis | Medium-quality | Genome-fragment | 67.450 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| KR093656 | Moraxella phage Mcat32 | 30958 | 42.677 | Moraxella | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Moraxella catarrhalis | Medium-quality | Genome-fragment | 67.280 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| KR131710 | Fusobacterium phage Funu1 | 39921 | 26.986 | Fusobacterium | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Fusobacterium nucleatum 7_1 | High-quality | High-quality | 99.350 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | temperate | parA orf_14;integrase orf_66 |
| KR131750 | Enterococcus phage Ec-ZZ2 | 41170 | 34.596 | Enterococcus | Group I | Efquatrovirus | Efquatrovirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Enterococcus faecium | Complete | High-quality | 100.000 | DTR (high-confidence) | Efquatrovirus | Efquatrovirus EcZZ2 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| KR136259 | Polaribacter phage P12002L | 48689 | 28.935 | Polaribacter | Group I | Incheonvirus | Incheonvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Unspecified | High-quality | High-quality | 98.900 | AAI-based (high-confidence) | Incheonvirus | Incheonvirus P12002L | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| KR136260 | Polaribacter phage P12002S | 49847 | 28.933 | Polaribacter | Group I | Incheonvirus | Incheonvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Unspecified | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Incheonvirus | Incheonvirus P12002S | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| KR149290 | Acinetobacter phage Fri1 | 41805 | 39.287 | Acinetobacter | Group I | Friunavirus | Friunavirus | Beijerinckvirinae | Autoscriptoviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Acinetobacter baumannii 28 | Complete | High-quality | 100.000 | DTR (high-confidence) | Friunavirus | Friunavirus Fri1 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| KR149291 | Klebsiella phage K5 | 41698 | 52.492 | Klebsiella | Group I | Przondovirus | Przondovirus | Studiervirinae | Autotranscriptaviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Klebsiella pneumoniae KSM 5-1 | Complete | High-quality | 100.000 | DTR (high-confidence) | Przondovirus | Przondovirus K5 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic |