INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_029033 | Achromobacter phage phiAxp-1 | 45045 | 56.017 | Achromobacter | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Achromobacter xylosoxidans A22732 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_029042 | Salmonella phage 38 | 156833 | 44.616 | Salmonella | Group I | Kuttervirus | Kuttervirus | Cvivirinae | Ackermannviridae | Pantevenvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Salmonella typhi O | High-quality | High-quality | 99.240 | AAI-based (high-confidence) | lytic | ||||
| NC_029043 | Mycobacterium phage SweetiePie | 53184 | 63.472 | Mycobacterium | Group I | Turbidovirus | Turbidovirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_32;immunity orf_70 | |||
| NC_029044 | Mycobacterium phage Breeniome | 154434 | 64.780 | Mycobacterium | Group I | Bixzunavirus | Bixzunavirus | Ceeclamvirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 96.800 | AAI-based (high-confidence) | lytic | ||||
| NC_029045 | Salmonella phage 37 | 60216 | 56.527 | Salmonella | Group I | Chivirus | Chivirus | Unclassified | Casjensviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Salmonella gallinarum | Medium-quality | Genome-fragment | 89.600 | AAI-based (high-confidence) | temperate | integrase orf_51;integrase orf_82 | |||
| NC_029046 | Sinorhizobium phage phiLM21 | 50827 | 60.661 | Sinorhizobium | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Sinorhizobium sp. LM21 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_2 | |||
| NC_029047 | Verrucomicrobia phage P8625 | 32894 | 50.967 | Verrucomicrobia | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Puniceicoccales sp. IMCC8625 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_029048 | Clostridium phage phiCD211 | 131704 | 26.415 | Clostridium | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Clostridium difficile | Complete | High-quality | 100.000 | DTR (high-confidence) | temperate | antirepressor orf_28;integrase orf_51;integrase orf_57;antirepressor orf_134;integrase orf_152 | |||
| NC_029057 | Vibrio phage qdvp001 | 134742 | 35.349 | Vibrio | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Vibrio parahaemolyticus ATCC 17802 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_029058 | Lactobacillus phage LfeInf | 106071 | 38.162 | Lactobacillus | Group I | Hopescreekvirus | Hopescreekvirus | Unclassified | Herelleviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Lactobacillus fermentum | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic |