INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_028663 | Cyanophage P-TIM40 | 188632 | 40.717 | Prochlorococcus | Group I | Libanvirus | Libanvirus | Unclassified | Kyanoviridae | Pantevenvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Prochlorococcus sp. NATL2A | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_028664 | Klebsiella phage Kp2 | 43963 | 53.784 | Klebsiella | Group I | Drulisvirus | Drulisvirus | Slopekvirinae | Autoscriptoviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Klebsiella pneumoniae | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_028665 | Gordonia phage GTE6 | 56982 | 67.797 | Gordonia | Group I | Dexdertvirus | Dexdertvirus | Schenleyvirinae | Stackebrandtviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Gordonia terrae strain CON34 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_028666 | Streptococcus phage Str-PAP-1 | 36595 | 35.289 | Streptococcus | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus parauberis | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | cro orf_14 | |||
| NC_028667 | Pseudomonas phage vB_PaeS_PM105 | 39593 | 63.100 | Pseudomonas | Group I | Mechnikovvirus | Mechnikovvirus | Guarnerosvirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas aeruginosa | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_12 | |||
| NC_028668 | Gordonia phage GMA3 | 77779 | 51.263 | Gordonia | Group I | Gamtrevirus | Gamtrevirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Gordonia malaquae BEN700 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_028669 | Staphylococcus phage phiJB | 43012 | 34.730 | Staphylococcus | Group I | Phietavirus | Phietavirus | Azeredovirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Staphylococcus aureus Jevons B | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_1;cro orf_5;antirepressor orf_9;integrase orf_39 | |||
| NC_028670 | Klebsiella phage KpV41 | 44203 | 53.967 | Klebsiella | Group I | Drulisvirus | Drulisvirus | Slopekvirinae | Autoscriptoviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Klebsiella pneumoniae | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| NC_028671 | Enterococcus phage vB_EfaS_IME197 | 41098 | 34.058 | Enterococcus | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Enterococcus faecalis | High-quality | High-quality | 99.370 | AAI-based (high-confidence) | temperate | integrase orf_31;cro orf_38;antirepressor orf_39 | |||
| NC_028672 | Cronobacter phage PBES 02 | 149732 | 50.725 | Cronobacter | Group I | Certrevirus | Certrevirus | Vequintavirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Cronobacter sp. | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic |