INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_028653 | Gordonia phage GTE8 | 67617 | 65.957 | Gordonia | Group I | Foxborovirus | Foxborovirus | Emilbogenvirinae | Zierdtviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Gordonia terrae strain G232 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_028654 | Mycobacterium phage Sparkdehlily | 56275 | 61.235 | Mycobacterium | Group I | Cheoctovirus | Cheoctovirus | Gracegardnervirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 97.730 | AAI-based (high-confidence) | temperate | integrase orf_45;immunity orf_47;antirepressor orf_48 | |||
| NC_028655 | Yersinia phage vB_YenP_AP10 | 39235 | 51.757 | Yersinia | Group I | Apdecimavirus | Apdecimavirus | Studiervirinae | Autotranscriptaviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Yersinia enterocolitica 6471/76-c serotype O:3 | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| NC_028656 | Enterobacteria phage VT2phi_272 | 65955 | 50.104 | Enterobacteria | Group I | Oslovirus | Oslovirus | Sepvirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Escherichia coli O157:H7 strain 71074 | High-quality | High-quality | 99.990 | AAI-based (high-confidence) | temperate | integrase orf_1;integrase orf_2;antirepressor orf_8;antirepressor orf_13;antirepressor orf_33;cro orf_36;cro orf_37;antirepressor orf_55 | |||
| NC_028657 | Pseudomonas phage YMC11/02/R656 | 60919 | 58.739 | Pseudomonas | Group I | Bugaksanvirus | Bugaksanvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas aeruginosa YMC11/02/R656 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | cro orf_55 | |||
| NC_028658 | Mycobacterium phage Swish | 68735 | 66.480 | Mycobacterium | Group I | Pegunavirus | Pegunavirus | Bclasvirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 98.930 | AAI-based (high-confidence) | lytic | ||||
| NC_028659 | Klebsiella phage vB_KpnM_KB57 | 142987 | 44.616 | Klebsiella | Group I | Mydovirus | Mydovirus | Vequintavirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Klebsiella pneumoniae M-9 | High-quality | High-quality | 96.910 | AAI-based (high-confidence) | lytic | ||||
| NC_028660 | Escherichia phage phi191 | 61035 | 50.189 | Escherichia | Group I | Oslovirus | Oslovirus | Sepvirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Escherichia coli O111:H2 strain ED 191 | High-quality | High-quality | 92.440 | AAI-based (high-confidence) | temperate | antirepressor orf_3;antirepressor orf_6;cro orf_22;antirepressor orf_27;antirepressor orf_28;antirepressor orf_45;integrase orf_53 | |||
| NC_028661 | Pseudomonas phage PPPL-1 | 41149 | 57.003 | Pseudomonas | Group I | Hennigervirus | Hennigervirus | Studiervirinae | Autotranscriptaviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas syringae pv. actinidiae KBE9 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_028662 | Mycobacterium phage Phlei | 50418 | 60.062 | Mycobacterium | Group I | Phleivirus | Phleivirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium phlei | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | parA orf_26 |